Etheostoma spectabile (orangethroat darter): 116702472
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Entry
116702472 CDS
T08457
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H-like isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04010
MAPK signaling pathway
esp04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116702472
04020 Calcium signaling pathway
116702472
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
esp04040
]
116702472
Ion channels [BR:
esp04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
116702472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
116702472
NCBI-ProteinID:
XP_032392567
LinkDB
All DBs
Position
15:complement(4541573..4655978)
Genome browser
AA seq
2539 aa
AA seq
DB search
MTDGEGRARFQYAECPEAQVQEKVREEVRLAIPTPYRNDAPGQDVDPGGGHDEEEEEEVE
KRRGRRRRRRSGTGRGDGAEWSPEVQEHEDQEPEVEGGPTLGVRIRAPIRDPDCVSEEEQ
QQQQQQLYPVLAPMAFFCLKQTTKPRNWCLRVVCNPWFEHVSMLVILLNCVTLGMFQPCE
DVTCQSEWCRILQVLDDCIFAFFAVEMVIKMVALGIFGSNCYLGDKWNQLDFVIVMAGVL
EYSLDGHNASLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFIF
GIVGVQLWAGLLRNRCFLGDNHRIITMYNLSISEYYMSEEGEDSPFICSAPRENGMLRCS
SVPPYMEGGAECTLPAPHLNSALIGMGGASVNGCVNWNQYYNVCRRGNYNPHKGAVNFDN
IGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFS
ETKQRENALMREQRARYMSNDSTLASYSEPGSCYEEMLRYISHLYRKFTRRLQRIYSGWH
SKRRKKVNPNGGGSNGGGNGHGHGSSRGCGGLGPGSALWLRPIHNLLQHHQHQHCRLSNG
GQHSISVTPAEHTDSEGGEELEMKSIPVQTESTNGNGGSGGPSTVTQGMGALLGRLNGGM
NYPTILPSFVCSYSSKTPPPHSQQRGHSPEQHPPNHPASEHTETLNKLYQLMGQHSRQRL
LYQLAGVVPSPLLLELLSCPMCARSLETLELELGDLEGGRGEADGLHNFPQGGDLRGGRV
RVRRRGVVEYKNGVVRAWVGFREKLKRIVESKYFNRGIMIAILVNTLSMGIEYHEQPEEL
TDVLEISNIVFTSMFVLEMGFMLLAFGLLGYIRNPYNIFDSIIVIISVWEIIGQADGGLS
VLRTFRLLRVLKLVRFLPALRRQLVVLMKTMDNVATFCMLLMLFIFTFSILGMHLFGCKF
SLETENGDTIPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSPWAALYFVALMTF
GNYVLFNLLVAILVEGFQAEGDANRSESDDEKKSDNFEEDEKVEQLRDTELKMYSLMMTA
NGHVDPRGSMAPPIIMHTAATPMPTPKGSLGPESVLGEELMFSQGVPQYGEVGLGFSEPG
SGHAESRRGSSTSMDPLSYDQHSLSLSSPGRRSPLPPRSWGSRRSSWNSLGRAPSLKRRD
TSGERESLLSGEGGEEEDGGQDKAEAGVNNRLRPESLELLPASTLCPSIIAEYSDCNGRT
VTYDPNVNSEPKDDSLPEDDMDDESSFWYWIKRELRNMKPRWCIEHEDWTLYLFSPESIL
RGWCQSVISHKLFDHVVLVFIFLNCITIALERPEIQLHSKERVFLSVSNYVFTVIFLAEM
AIKVVALGFCFGKQTYLQSSWNVLDGFLVFVSLVDILVSLAYTSGNRILGILRVLRLLRT
LRPLRVISRAPGLKLVVETLITSLRPIGNIVLICCAFFIVFGILGVQLFKGKFYHCEGPD
TKNITNKSDCLQANYRWIRRKYNFDNLVQALMSLFVLSCKDGWVNIMYDGLDAVGVDQQP
VRNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQDQEEEEARLREEKRLKMIEK
KRRSKENGGAEAKQRPYYADYSPIRLSIHTLCTSHYLDLFITFIICINVFTMSIEHYNQP
QYLEEVLKYCNYVFTCIFIVEALLKLTAFGIQRFFKDRWNQLDIAIVALSIMGITLEELK
MNAALPINPTIIRIMRVLRIARVLKLLKMATGMRSLLDTVMQALPQVGNLGLLFMLLFFI
YAALGVELFGRLVCNDNNPCEGLSRHATFENFGMAFLTLFRVSTGDNWNGIMKDTLRECH
PEDRHCLSYLPLVSPIYFVTFVLMAQFVLVNVVVAVLMKHLEESNKEAKEDAEMDAEIAL
EMAMENQRKLSTTSDNSSVGGTYVGPCPHSPGQVEEEVQCGDQDLLSSRKMSVSRMHSLP
NDSYMFRPVRPASAPNPLEEVELSPQHQHSGSVTSVHSQPCESRGLLQVPDVSPIHPRSP
PTLTMPRIAPPTPSPSPRALHRQVALKVDSVESQGCEQQERPNPVHLPPISPSPLSPLTS
SPSPLPPPPPSSPSSLYLPSCSHSAFPLPPPSPLHPLLSSPSPVPPPPSSPSLLLPPPRS
PRLPLRPPSLQRPRPSSAVSLCDPADEEVYHITSSASHRWWDEEGGGQESRGKVGRSHSL
SPYTTPFSLNSPSPPPLPPSSSRSKLSLLGAALMDCDSRKALSVDNQAVRDRPTSLSAGY
PDDQRRHSIEVCLPQAVLTSDDQHFAREAHRLEKGGQAFPVRVQSVGGGHRKKKISPPCI
SIHPPSERELPQIASPPKLADCSMMLRRRTPSYDLTPHSQSNTQDVTADSQMRTQMHSPR
HTPLTPIHVPLQAHSPTHTLIRSRASTPTHTHTYTPPHVSTPTLPHIPISPNIFIQPHAP
LVPMPFSQAHSLSAAARHSSLTGDYIPLPQFTFEEPQSRYMSGLSAGLSDTDTATCSSPF
DNRLGSGAGFSAKNRRTAQ
NT seq
7620 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggcgaggggagagcgcgctttcagtacgcagagtgcccggaggcacaggtg
caggagaaggtgcgggaggaggtgaggcttgctattccgacgccatacaggaatgacgcc
cctggtcaggatgttgaccctggaggaggccatgatgaggaggaagaggaggaggtggag
aagaggagggggaggaggaggaggaggagaagcggtactggtcggggcgatggagcagaa
tggagtcccgaggttcaggagcatgaagaccaggaaccggaagtggaaggtggaccaaca
ttgggagttcgcatcagggctcctattcgggatccagactgcgtttccgaggaggagcag
cagcagcagcagcagcagctgtaccctgtcctggcccccatggccttcttctgcttaaag
caaacaacaaagcctcgcaactggtgtcttcgcgtcgtctgtaacccatggtttgagcac
gtatccatgctggtgatcctgctcaactgcgtgactctggggatgttccagccctgtgaa
gacgtcacgtgtcagtcagagtggtgccgcatcctacaggtattggacgactgtatcttt
gctttctttgctgtggaaatggtcatcaagatggtggccctgggaatctttggctccaac
tgttacctaggtgacaagtggaaccagcttgatttcgtcatcgtcatggcaggggtgctg
gagtattctctggatggccacaacgccagtctctcagccattcgtaccgtccgagtgctc
aggccactgcgggctatcaacagagtaccaagtatgaggatcttggtgacgctgctgttg
gacacactgcccatgctgggaaatgtacttctcctctgcttctttgtctttttcatcttt
ggtattgtgggagtccaactgtgggcggggctactgcgcaaccgctgcttcctgggagat
aaccataggattataacaatgtacaacttgtccataagtgagtactacatgtccgaggaa
ggtgaagacagcccattcatctgctcggctccccgcgagaacgggatgctgcgctgcagc
agcgtgccgccctacatggagggcggggccgagtgcaccttgcccgctccccacctaaat
tcagctctgattggaatggggggggccagtgttaacggctgtgttaattggaaccagtac
tataatgtgtgtcgccgtgggaactacaaccctcacaaaggggcggtcaactttgacaat
atcggctacgcctggatagccatattccaggtcattactttggaaggatgggtagatatc
atgtactatgtcatggatgctcactccttctacaattttatatattttatattgctcatt
atcgtgggctctttcttcatgatcaacttgtgcctcgtggtcatcgccacccagttctcc
gagacaaagcaaagggagaacgctctgatgagggagcagcgtgctcgctacatgtccaac
gactccaccctcgccagctacagcgaaccaggctcatgctacgaggagatgctacgctac
attagccacctatatcgcaagttcacgcgcagactgcagaggatatactctggatggcac
agtaaaaggcgtaaaaaggtgaatcctaacggcggaggcagtaacggcgggggtaacggc
catggccacggctccagcagaggctgcggaggcttaggcccgggtagcgcattgtggttg
agaccgatccataacctcctgcagcaccatcagcaccagcactgtcgactcagcaatggg
ggccagcactccattagcgtaacacctgccgaacacactgacagtgaaggaggggaggag
ctggagatgaagtccattcctgtccagacagaaagtacaaatggaaacggcggcagcggc
ggcccgtccactgttacccagggcatgggggcattgctcgggcgtctgaatggcgggatg
aactatccaacaattctgccgtcgtttgtgtgcagctacagcagtaagacgccgcccccc
cactcccagcagcgtgggcacagtccagagcagcacccaccaaaccacccagcatctgaa
cacacagagacactgaacaagctctaccagctcatggggcagcacagtcgccagaggcta
ctgtaccagctggcaggcgtggttcccagccccctgctcttggagctgttaagctgccca
atgtgtgcccgcagcctggagaccctagagctggaactgggagacctggagggaggcagg
ggagaggctgacggactgcacaacttcccccaggggggagacctgagaggcgggcgagtt
cgggtcagacggcgaggggtcgtggagtacaaaaatggagtggtccgggcctgggtaggc
ttcagggaaaaactgaagaggattgtggaaagtaaatacttcaaccgagggattatgatc
gctatcctcgtcaatactctcagcatggggatagagtaccacgagcagccggaggaattg
actgatgtgttagagatcagtaacatcgttttcaccagcatgttcgtcctggagatgggc
ttcatgctgctggcttttggcttgttaggatacatcaggaacccatacaacatattcgac
agcatcattgtgatcatcagtgtgtgggagataattggtcaagcagacggtgggttgtca
gtcctgcgaacatttcgtctgctgcgggttctgaagttggttcgcttccttcctgccctg
aggcgacaactggtagtgctaatgaagaccatggacaacgtcgccacgttctgcatgctg
ctgatgcttttcattttcacttttagtatactgggtatgcacctatttggctgtaaattc
agtcttgagactgagaacggagacaccatccccgaccgaaagaactttgactctctgctc
tgggctattgtcactgtgttccagattctaacccaggaggactggaatgtggtgttatat
aacggcatggcctccacctctccatgggcggctctctactttgttgctctgatgacattc
ggcaactatgtgctcttcaatttacttgtggccatcttggttgagggcttccaggctgag
ggtgatgctaatcggtcggagtcagatgatgagaagaaatctgacaattttgaggaggac
gagaaggtagaacagctcagagacactgagctaaaaatgtactctctgatgatgacagcc
aacggtcatgttgaccctcgcggctcgatggctcctccgataatcatgcacacggcagcc
acacccatgcccactcctaaaggctctctgggacctgagtcggtccttggggaggagctc
atgttcagtcagggggtgcctcagtatggcgaggttggactggggttttctgagcctgga
agtggtcatgcagagtctcgccgtggaagctccacctccatggaccctttatcctatgac
cagcattctctgagtctctcaagtcccggcaggcgctcccctcttcctcctcgctcatgg
gggagccgtcgctccagctggaacagtctgggaagagcgccgagcctcaaaaggcgagac
accagcggagagagggagagcctgttgtctggggagggaggagaggaggaagatggtggg
caggacaaggcggaggccggggtaaacaacagactacggccagaatccttggagctgctg
ccggcgtccactctttgtccttccataatagcggagtacagtgactgtaatgggagaacc
gtgacctatgaccccaatgtgaactccgaacccaaggatgattccttgcctgaagatgac
atggatgatgaaagttctttctggtactggatcaaaagagagctccgtaacatgaagcca
cgctggtgcattgagcatgaagactggacgctgtatttgttctctccagagagcatatta
cgtgggtggtgccaaagtgtgatctctcacaaattgttcgaccatgtagttctggttttc
atcttcctcaactgcatcaccattgctctggaaagacctgagatacagcttcatagcaag
gagcgagtgtttctgagtgtgtccaactacgttttcactgtgattttcctggcagagatg
gccattaaggttgtagctctcggtttctgctttggaaagcagacttacctccagtccagc
tggaatgttctggatggttttttggtgtttgtgtctctggtcgacattctggtctccctg
gcctacactagtggaaacaggatcctgggaattctcagagtcctacgtctgctacgaaca
ctacgcccactgagggtgatcagccgagccccgggattgaagctggttgtggagacgctc
atcacctctctcagacccatcgggaacatcgtccttatctgctgcgccttcttcattgtc
tttggcatcttgggtgtgcagctgttcaaagggaagttctaccactgtgaaggtccggac
acgaaaaacatcaccaacaagtctgactgtctgcaggccaactaccgctggatacgaagg
aagtacaactttgacaacctggttcaggctctgatgtctttgtttgtgctgtcctgtaag
gatggctgggtcaacatcatgtatgacgggctggatgcagtgggagtggaccaacagcct
gtaagaaaccacaacccctggatgctgctctacttcatctctttcctgctcatcgtcagc
ttcttcgtcctcaacatgtttgtcggtgtcgtggtggagaacttccacaagtgtcgtcag
gaccaggaagaggaggaggcccgcttacgggaagagaagaggctcaaaatgatagagaaa
aagcgcaggagtaaggagaatggaggggctgaggccaagcagaggccttactatgcggac
tattctcccattcgtctgtccatccacacactatgtaccagccactacctggacctgttt
atcaccttcatcatctgcatcaacgtcttcaccatgagcatcgagcactacaatcagccg
cagtatttagaggaggttctgaagtactgtaactacgtgtttacctgcatcttcattgtc
gaggccctgctcaaactcacggcattcggcatacaaaggttcttcaaagacaggtggaat
cagctggacatagctatagtggcactgtccatcatgggcatcaccctggaggagctgaag
atgaacgcagcactgcccataaatcctaccatcatcagaatcatgagagtactcagaata
gcacgagtgctaaaacttctgaagatggccacagggatgcgatccctgctggatacggtc
atgcaagcgctgccacaggtgggaaatctcggtctcctcttcatgctgctcttcttcatc
tacgctgcgctgggagtggaactctttggcagactggtgtgcaatgacaacaacccatgt
gagggtctgagtcgccatgcaacgtttgagaactttgggatggccttcctcacactgttt
cgagtgtccactggagacaactggaatgggattatgaaagacacgttgagggagtgtcat
ccagaggaccgccactgtctctcctacctgcctttagtctctccaatttactttgtcacc
tttgtgctaatggcccagtttgtgctggtcaatgtggtggtggctgttttgatgaaacat
ctcgaggaaagcaacaaggaggctaaagaggatgcagagatggatgcagagattgccttg
gaaatggctatggagaaccaacgtaaattaagcacaacctctgacaacagttcagtggga
ggaacctatgttgggccatgtccacattcacctggacaggtggaggaagaggtgcagtgc
ggtgaccaggatctgctgtcgtcaaggaagatgtctgtttccaggatgcactctctgcct
aacgacagctacatgtttcgacctgtgcggcccgccagcgcccccaaccctttagaggag
gtagagcttagtccccagcaccagcattcaggctcagtgacgtcggtccactcccagcca
tgtgagagccgcggattgctgcaagtaccagacgtttcccccattcaccctcggtcacct
cccaccctcaccatgccccgcatcgccccacccacgcccagcccctccccacgggccctg
cacagacaggtggcccttaaagtggattctgtggagtcccagggttgtgagcaacaggag
aggcccaaccctgtccatctgcctcccatctccccttctcccctctctcctcttacttcc
tccccatctcccctgcctcctcctcctccttcctccccctcctccctgtatctcccatcc
tgctcccattcagccttcccgctccctcctccctcacctttgcatcctctactgtcctcc
ccttctccagtacctcctccaccatcttccccctcacttcttctcccaccacctcgctcc
ccccgcctccccctgcgccctcccagcctacagagacctagaccgtcctctgctgtctcc
ctctgcgacccggcagacgaggaagtgtatcacatcaccagctcagccagccacaggtgg
tgggatgaggagggaggagggcaggagagcagggggaaggttggccgcagccactccctc
tccccttacaccaccccgttttctctcaactccccttctcctcccccgctaccaccttcc
tcctcgaggagcaagctcagtctgcttggggcggcattgatggactgtgactctaggaag
gctttaagcgttgacaaccaggccgtccgggacaggccgacatcattgtctgctggttac
cctgacgaccagcggcgccactctattgaggtctgcctcccacaggctgtcctcaccagt
gacgaccaacattttgcacgtgaggcccacaggttggaaaaaggtggtcaggcatttccc
gtgagggtgcagtcagtcgggggcggccacagaaagaagaagattagtcctccttgtata
tccatccacccgccctcagagagggaactcccgcaaattgcctcacccccaaaactggct
gactgcagcatgatgctgagacgccggacaccatcctacgacttgaccccgcattcccag
tcaaacacacaagacgtcactgcggattcacagatgcgcacacagatgcactccccgagg
catacaccactcacacctatccacgtaccactgcaagcacactcgccaacacacacattg
atacgctcacgggcgtctaccccgacacacactcatacatacactccaccgcatgtatcc
acacctacactcccacacatcccaatcagcccaaacatcttcatccagccacatgcacct
cttgtcccgatgcctttctcacaagcgcactccctctccgctgctgcgaggcactcctct
ctcacaggggactacatccccctcccacagttcaccttcgaggaaccgcagtccagatac
atgagcggcctgtcggctggtctatcagacacagatacagctacctgctcttcccccttc
gacaacagactgggaagcggtgcaggattcagtgcaaagaatcgaaggacagcccaatga
DBGET
integrated database retrieval system
