Etheostoma spectabile (orangethroat darter): 116702658
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Entry
116702658 CDS
T08457
Symbol
grin2a
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04020
Calcium signaling pathway
esp04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
116702658 (grin2a)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116702658 (grin2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
esp04040
]
116702658 (grin2a)
Ion channels [BR:
esp04040
]
Ligand-gated channels
Glutamate (ionotropic)
116702658 (grin2a)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
116702658
NCBI-ProteinID:
XP_032392873
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All DBs
Position
15:complement(4361408..4527245)
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AA seq
1548 aa
AA seq
DB search
MKWFGSMSLSSKRSKRRSRRSSSCSSSSGSNCVLLSLALLVAVTLIADPVAAQKQRTGGA
SEKVPVLNIAVILGRTRYISERDIRALWSKEDPIDVNVVTLLVNETDPKSIITHMCDLMS
GTKIHGVVFGDGTDQEAIAQILDFISSQTLIPILGIHGGSSMIMADKDVKSTFFQFGASI
QQEALLMLNIMEEYDWHIFSIVTSKFPGYQEFINILKLTVDNSFVGWDLQNVIILDAVEE
DSRSQIMLKKVQSPVVLLYCSKDEAVYVLEEARSLGLTGFGYIWIVPSLTTGNPEVTPEE
FPPGMISVSYDDWDYPLEARVRDGLGIITSAAAAMLEEYGDIPEAKTSCYGLMEKTTKLP
PSALHKYMMNVTWDGRDLSFTEDGYQEYPKLVVIVLNKEREWEKMGKLDNRSLTLKYPVW
PRFNSFGDAELDDNHLSIVTLEEKPFVIVEDVERLTGTCMRNSVPCRKHIKDNTTEAGGT
YIKKCCKGFCIDILKKIAKYVKFTYDLYLVTNGKHGKKINNVWNGMVGEVVYKKAVMAVG
SLTINEERSEVIDFSVPFVETGISVMVSRSNGTVSPSAFLEPFSASVWVMMFVMLLLVTA
MAVFMFEYISPLGFNRNLAQGRDPHGPSFTMGKAVWLLWGLVFNNSVPVQNPKGTTSKFI
VSVWAFFAVIFLASYTANLAAFMIQEEFVDQVTGLSDNKFQNPYAYSPPFRFGTVPNGST
ERNIRKNYPAMHQYMVKYHQTGVVDALVSLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTI
GSGYIFATTGYGIALQKGSYWKRQVDLAILAIIGDGEMEELEAQWLTGICHNEKNEVMSS
QLDVDNMAGVFYMLATAMGLSLITFVSEHLFYWRLRYCFTGVCTGTPGLLFSISRGIWSC
IHGVHIDMKKKSDLDFSPQDKMLKLIKSAKQMTNMSNLSGSRMNSPKREFMHSAGPMIMD
MMAEKGNFIYADNRSYAPKDMIYGDTGDLQSYLANRHKDHLNNYIFQGGQHPLTLNDANP
NTVEVAVSADSVQTNAKPPRTLWKKSVDTLRSGPPGPPPMPDMLMPDPRMSMKTQRYLPE
DAAHSDISDCSSRAASYKDPENNKHLKPKDNLKKRSMTSKYPRDCSEVELSYLKTKQVTG
GTNQTGRGGGEKIYTIDSERELSLHSDPIHYRESRGLAADDLDYPEIYSDHSDNYRKCEQ
PIIHLNSSPLHHTDSDLLPDPTYSKHYSMKEKNIVLSPHESIDRYKQTHCRSCLSKVSAS
YPPGAPYTPAVPAAASATRSPYNRCEACLHTANLYDISEDQLLADPLVSPTRHHQQQQQP
DEMFGLYWPQTDGPHVQKRNRLRLSRQHSFDNIMLEKPKDVDLGRPARSVSLKEKDRFLD
STSDSHYANLFGMRPYSGRLFGTGSKSMLFNHNLEESKRSKSLYPAHGSENPFLSHSLRD
DTSSRLVHGRSSSDIYNQLAVASPAAAIGAPPIKTRNDANNLRSSVKSTTSYCSRDGRIA
NDMYNKEHVMPYSANKTSAYPAPRGVLNSAQFSNRRVYKKIPSLESDV
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
atgaagtggtttggcagtatgtccctcagcagcaaaaggagtaagaggaggagtagaagg
agcagcagttgcagcagtagcagtggtagtaattgtgtgctgctgtccttggctctcctg
gtggcggtgaccctgattgcggaccccgtggcggctcaaaagcagcgaactggcggtgcc
tcggaaaaagtgccggtcctgaacattgcggtgatcctgggacgcacacgctacatctca
gagcgggacatccgggcactgtggagcaaggaggaccccattgacgtcaacgtggtcaca
ctgctggtcaacgagaccgacccgaaaagcatcatcacccacatgtgcgacctgatgtcc
gggacaaagatccacggtgtggtgtttggggatggcaccgaccaggaggccatcgcccag
attttggattttatttcctcgcagacgctcattcccatcctgggcatccatggaggctcg
tccatgatcatggctgataaggacgtgaagtcgacattcttccaattcggtgcctccatc
cagcaggaggctctgctgatgctgaacatcatggaggagtatgactggcacatcttctcc
attgtcacatcgaagttccccggctatcaggagttcatcaacatcctaaaacttaccgtg
gacaacagttttgtgggctgggacctgcagaatgtcattattctggacgcggtggaggaa
gacagccggtctcagatcatgctcaagaaggtccagtccccagtggtcttgctctactgt
tccaaggatgaggcggtgtacgtcctggaggaggctcgctctctgggcctcacgggattt
gggtacatctggattgtgccgtcgctcaccactgggaacccggaagtaacacccgaagag
tttccgccggggatgatttcagtgtcatacgacgactgggactacccactggaggcacga
gttcgggatggtctggggatcataacgtcagcagcggcagccatgttggaggagtatggc
gacatccctgaagcgaagacatcctgttacggcctgatggagaagacaaccaagctgcca
cccagtgcactacacaagtacatgatgaatgtgacatgggatggcagagacttgtcattc
acagaagacggctaccaggaatacccaaagctggtggtcattgttctcaacaaggaacga
gagtgggagaagatggggaaactggacaaccgcagcctgacacttaagtacccagtgtgg
ccgcgcttcaactccttcggtgatgccgagctcgatgacaaccacctgtccatcgtcacg
ttagaggagaaaccttttgttattgtggaggacgtagaaaggctcaccggtacctgcatg
aggaactccgtgccctgcaggaagcacatcaaagacaacacaacagaggctggtgggaca
tacatcaagaagtgctgcaagggcttctgcatcgatattctgaaaaagattgccaaatat
gtgaagttcacctatgacctgtacctggtaaccaatggcaagcatggcaagaagatcaac
aatgtctggaatgggatggtgggagaggtggtctataagaaagccgtcatggccgtcgga
tctctgacgatcaatgaggagcgttctgaggtcatcgatttctccgtcccgttcgtggaa
actgggatcagcgtcatggtctcccgtagcaacggaacggtctccccgtcagcctttcta
gagccattcagtgcatcagtgtgggtgatgatgtttgtgatgctcctactggtgactgca
atggctgtcttcatgtttgaatacatcagtcctcttggctttaacagaaacctggcgcag
ggaagagacccccatggcccttccttcacaatgggcaaggctgtgtggctgctgtggggt
ctggtcttcaacaattctgtgccagtgcagaaccctaaaggaactaccagtaagttcata
gtgtctgtgtgggccttcttcgctgtcatcttcctggcctcctacactgccaacctggct
gccttcatgatccaggaggagtttgttgatcaagtcaccgggctttccgacaacaagttt
cagaacccgtatgcatactcgcctccgttccgcttcgggacggttccaaacggatccaca
gagaggaacatcaggaagaactaccccgctatgcaccagtacatggtaaaatatcatcaa
accggagtcgtggatgcacttgtcagcctcaaaacggggaaactggatgccttcatctat
gatgctgcagtgttgaactacatggccggcagagatgagggatgtaagctggtgaccatt
ggcagcgggtacatctttgctaccaccggttacggcattgctctacagaaaggctcctat
tggaaacgacaggtggatctggctatcctggccatcatcggagacggtgaaatggaggaa
ctagaagcccagtggctgacaggaatttgccacaacgagaagaatgaggtgatgtccagt
cagctggatgtggacaacatggctggggtcttctacatgctggccacggccatgggactc
tctctcatcacctttgtgtctgagcatctcttctattggaggctaagatattgcttcact
ggggtttgcaccggcacaccaggtcttctcttctccatcagtcggggaatctggagttgc
atccatggagtccacattgacatgaagaaaaagtcagatctggactttagccctcaggac
aaaatgcttaagctcattaaatcagcaaaacagatgaccaacatgtctaacctgagtggt
tcccgcatgaactcacccaaacgtgagttcatgcactcagctggtcccatgatcatggac
atgatggcagagaagggcaactttatctatgctgacaaccgaagctacgctcccaaagat
atgatctatggggacactggtgacctgcagtcttatcttgctaaccgccacaaagaccac
cttaacaactacatcttccagggtggccagcatcctctgaccctaaatgatgccaatccc
aacacagtagaggtggcagtgagtgctgactcagtccagaccaatgccaagccgccccgg
accctgtggaagaagtcagtggacacactccgttcagggcctcctgggccccctccgatg
cctgacatgctcatgccagacccacgaatgtcgatgaagacacagcgctacctccctgag
gatgcagcccactctgatatctccgactgttccagcagagcagcctcctacaaggaccca
gaaaacaacaagcacctgaagcccaaggacaacttaaaaaaaagatcgatgacgtcaaaa
tacccaagggattgcagtgaggtagagctgtcctacttaaaaactaagcaggtcaccggt
ggaaccaaccaaactgggagaggaggaggagagaaaatttacactatcgactcagaacga
gagctgagcctgcactcagaccccattcactatcgtgagagtcgcggccttgctgcagac
gatttggattatcccgagatctactctgaccacagtgacaactataggaagtgtgagcag
cccatcattcatctgaactcctcgcctttgcatcacaccgattcagatcttctaccagac
ccaacttactctaaacactacagcatgaaagagaaaaacattgtcctgtcccctcatgaa
tccattgaccgctataaacagacacattgtcgatcctgcttgtcaaaagtgagtgctagc
tatccaccgggagcgccatacactcctgctgtacctgcggcagcttctgccacacgctca
ccctataatcggtgtgaagcatgcctccacacagccaacctgtatgacattagtgaggac
cagcttcttgcagaccccttggttagtcccaccaggcaccaccaacagcagcagcaacca
gatgaaatgtttggtctgtattggccacagacagatgggccacatgttcaaaagagaaac
cgcttgaggctgagtcgtcagcactcctttgacaacatcatgcttgaaaagcccaaggat
gtagacctgggtcgaccggcacgcagtgtcagcctcaaggagaaggatcgcttcttggac
tccacatctgactcgcattatgcgaacctcttcggcatgcgtccctactctggcagactg
tttggcaccgggtccaaatcaatgctgtttaaccacaacctggaggagagcaagaggagc
aagtccctgtacccggcccatggctcggaaaaccctttcctcagccactcgctgagggat
gacaccagcagcagactggtccatgggcgtagctcctctgatatttacaatcagctggca
gtggcctcacctgcagcggccatcggagcgccccccatcaaaacacgcaatgatgcgaac
aatctccgctcttccgttaaatccaccacttcatactgctcacgggatgggcggatagcc
aatgacatgtacaataaagagcatgtgatgccttactcagccaataagactagtgcatac
ccggccccacgtggcgtcctaaactcagcccagttcagcaatagacgggtgtataaaaaa
atccccagtctggagtcagatgtttag
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integrated database retrieval system
