Etheostoma spectabile (orangethroat darter): 116702974
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Entry
116702974 CDS
T08457
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2B-like isoform X1
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04020
Calcium signaling pathway
esp04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
116702974
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116702974
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
esp04040
]
116702974
Ion channels [BR:
esp04040
]
Ligand-gated channels
Glutamate (ionotropic)
116702974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
116702974
NCBI-ProteinID:
XP_032393431
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All DBs
Position
2:complement(16102515..16183369)
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AA seq
1788 aa
AA seq
DB search
MASSTPTSGWYTNSRRSWACCTWGLRRLRKSRSNVFIRCEGRHLHSTMLVSLHPSPSRLQ
DKRFVPPSSSPHSPPQDQSSHHPRLTLPFLSLSFSLILLSMLLLPVCESRRGGGPGTGPG
GAPGGQGGQRGGGTQRGVVIPPQYSPALPALPPINPKLITSLSIAVILVGNSSEVTLGVG
LEKEDFLHIPYPPKVDVVTMNETDPKSIINRICAQMMRNSLQGVVFGDDTDQEAIAQILD
FISAQTHIPILGIRGGSSMVMAAKDDNSMFFQFGPSIEQQASVMLNIMEEYDWYIFSIVT
TYYPGYQDFVNKVRSTIDNSFVGWELEEVFLLDMSVDDGDSKIQNQLKKLQSPVILLYCT
KEEASTIFEVAHSVGLTGYGFTWIVPSLVAGDADHVPSVFPTGLISVSYDEWDYNIEARV
RDAVAVIATATSTMMLDRGPHTLLKSSCQGTPDKKSSNTGHSKEILKYLMNVTFEGRNLS
FSEKGHQMFPKLVIILLDKDRQWDRVGKWERGSLTMRYHVWPRFELYSAAEEREDHLSIV
TLEEAPFVIVEDVDPLSGTCMRNTVPCRKQLKLSNQTGDSGIYIKRCCKGFCIDILKKIA
KAVKFTYDLYLVTNGKHGKKVNGTWNGMVGEVVLKNAHMAVGSLTINEERSEVIDFSVPF
IETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLLVSAVAVFVFEYFSPVGYNRCL
ADGREPGGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTAN
LAAFMIQEEYVDQVSGLSDKKFQKPNEFSPPFRFGTVPNGSTERNIRNNYRDMHTYMTSF
HQKNVDEALHSLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKVFASTGYGIAIQKN
SGWKRAVDLAILMLFGDGDMEEFEALWLTGICHNEKNEVMSSQLDVDNMAGVFYMLGAAM
ILSLITFICEHWFYWQLRFCFMGVCSGQPGATFSISRGIYSCIHGVQIEENKSTIDSPSA
SMKKNMNNTHSNILRLLRTAKDMTAVPGINGSPHAALEYSHSGRDSAIYDIQEHRRSLVG
HPADCKSAPPYLPEDNMFSDYISEVERTFGNLPLKDNNLYQDHYLHHHPASALGMSGPPP
NRPRSLGSTSSLEGGMFDCDSLGGGVAPIFTTQPRPSMTHRNTNKFDLIAGHTPADSTQG
GFKGNNVYGRFSFKGGASSTGLIGGHDRYCGGGGGGSGGDDGNIRSDVSDISTHTVTYGN
LEGNNKRRKQYRDSLKKRPASAKCRREQDEIELSGLRRRAHHHTVHHHFPHGPLAHRTVS
PPLERKRGGGGGNSSPYIFRKDKENLRDFYADQFCSKEGKAKWEQEGGNGGSGVGGGSGG
GICKSLVPVEDFLKGKGKKPECKGGLGSVLAGQQAHTCWDKGVSGIGGGGIAGGDWDCRN
SHNVCHHGGGGACPTSGVGGCTSRPSSASCKRCDSCKIPPSNLYNISEDMVFAGMKSSVG
PNQMLTQAQRRKLGPGGRVLRRQHSYDTFVDLQREGASRMGGAGSGVGGQFPQPRSVSLK
DKDRFMEGPSPYAHMFERYAGERESSMFGGIGGDRAKGGSSFSLFHGGEGGLHQRSVGER
DLRDRDRAMMGGGGGGGGGGSSRGAGTYSLSKSLYPDKVNQNPFIPAFGDDQCLLHGAKP
YYVKKPQTQQQQQLLNNSRGGGDFHSSMGAASYLPASATAGVMSNVAPRFPKELCLGGVG
GPMGNHHGASKLLPVGRDTLGLGQGQRSFNGASNGHVYEKLSSIESDV
NT seq
5367 nt
NT seq
+upstream
nt +downstream
nt
atggcatcctccacaccaacatctggctggtacacaaacagcaggcggtcctgggcgtgc
tgtacctggggtctgaggaggctgaggaagagccgctccaacgtcttcatcaggtgtgaa
ggacggcatttacactccacaatgcttgtcagcctccacccttctccctcccgtcttcag
gacaagcgcttcgtccccccctcctcttccccccattctcccccccaggaccagtcctcg
catcatcctcggctcaccctgcccttcctctctctgtccttctctctgatcctcctctct
atgctcctcttacccgtctgcgaatctcgcaggggtggaggtccaggcacagggcctgga
ggtgccccagggggacaagggggccagaggggaggtggcacccagcggggcgttgtcata
cctcctcaatactctcctgccttaccggctcttccaccaatcaatcccaaactgatcact
tcactcagtatagcagtcatcctggtgggcaactctagtgaagtaaccctgggggttgga
cttgagaaagaggacttcctccacatcccttaccctcccaaagttgatgtggtcaccatg
aatgagaccgaccccaagagtatcatcaatcggatttgcgcacaaatgatgaggaactcc
ctgcaaggcgtagtgtttggtgatgacacggaccaggaggccattgctcagatcctggac
ttcatctctgcccagacacacatccccatcctgggcatcaggggaggctcctccatggtg
atggctgccaaggatgacaattccatgtttttccagtttggtccttccatcgagcagcag
gcctccgtcatgttgaacatcatggaggagtatgactggtacatcttctcaatagtcaca
acgtactaccctggctaccaggactttgtcaacaaggtacgcagtaccatcgataacagc
tttgtgggttgggagctagaagaagtcttcctactggacatgtcagtagatgacggagac
tccaagatccaaaaccagctaaagaaactgcagagtcctgtaattctactgtactgcaca
aaggaagaagcaagcactatcttcgaggtggcccattctgtgggcctcacaggttatggc
ttcacctggatcgtgccctcactggtggctggagatgcagaccacgttccctctgtcttc
cctacagggcttatctcggtgtcatatgacgaatgggactacaacatcgaggccagggta
cgtgatgcagtggctgtcattgccacggcgacctccactatgatgctggaccgggggcca
cataccctgctaaaatcaagctgccaaggaacacctgacaaaaagagctccaacaccggc
cactccaaggagatactgaagtacctcatgaatgtgacatttgaaggccgaaacctgtca
tttagtgaaaagggtcaccagatgtttcccaaactggtcatcattcttctagacaaggac
agacaatgggacagggttggcaagtgggagagaggctctctgacgatgaggtaccatgtg
tggcctcgctttgagctgtactctgcagcggaagagcgggaggaccacctgtccatcgtg
actctggaggaggcaccgtttgtcattgtagaggacgtggacccgctcagtgggacctgc
atgaggaacactgtgccgtgccgcaaacagctcaaactgagcaatcagaccggtgattca
gggatttacatcaagcgctgctgcaaaggtttctgtattgacatcctaaagaagatcgcc
aaggcggtcaagttcacttacgacctttacctggtcacaaatggcaaacatggaaagaag
gttaatgggacatggaacggcatggttggggaggtggtgttaaagaatgcccacatggca
gtgggttcgctcaccatcaacgaggagaggtcagaggtcattgacttctctgtgcccttt
atcgagacagggattagtgtcatggtctctcgtagcaacggcacagtatccccctccgcc
tttcttgagcccttcagtgctgatgtttgggtgatgatgtttgtgatgttgctgttggtg
tcagccgtggctgtgtttgtgtttgagtacttcagcccggtgggttacaatcgctgcctg
gcagatgggcgagagcccggcggtccctccttcaccattggtaaggccatctggctgctt
tggggtctggttttcaacaactctgtccccgttcagaatcccaaaggtaccaccagtaag
atcatggtgtcagtttgggccttctttgctgtcatctttctggcctcctacactgccaac
ctggctgccttcatgatccaggaggagtatgtcgaccaggtgtcaggcctgtcagataaa
aagttccagaagcctaacgaattctcaccgccattccggtttggcaccgtgcccaatggg
agtacagagcgcaacatccgcaacaactaccgggacatgcatacttacatgaccagcttc
caccagaagaatgtagatgaagcgctgcacagtctgaagaccggcaaactggatgccttc
atctacgacgctgcagtgctgaactacatggcgggcagagacgagggctgtaagctggtc
acgatcgggagtggcaaggtgttcgcctctaccgggtacggcattgccatccagaaaaac
tctggctggaaacgagctgtggatctggctatcctcatgctctttggagacggtgatatg
gaggagtttgaggccctgtggctgacaggcatctgccacaatgagaagaacgaggtgatg
agcagtcagctggatgtagacaacatggcgggggtcttctacatgcttggggccgccatg
attctctcattaatcaccttcatctgtgaacattggttctactggcaactgcgcttctgc
ttcatgggcgtgtgctcaggacagcccggggccactttctccattagccgaggtatctac
agctgcatccacggggtacaaattgaggaaaacaagtcaaccatagactcgccttcggca
tccatgaagaagaacatgaacaacacacactccaacatactgcggttgcttcgcactgcc
aaggacatgactgccgtcccgggcattaacggctctccacacgccgccctggagtacagc
cacagcggccgtgactcggctatctatgacattcaggagcaccggcgcagcttggtgggt
caccctgccgattgcaagtcagcgccaccctacctgccagaggacaacatgttcagtgac
tacatcagcgaggtggagaggacttttggcaacttgcccctgaaggacaacaacctgtac
caggaccattacctgcaccaccacccggcctcggctctgggtatgtccggccccccgcct
aataggccgcgtagcttaggcagcactagctcattggaggggggcatgttcgattgcgac
agtttagggggaggggtagcgcccatcttcaccacccagccccgtccttccatgactcac
aggaataccaataaatttgacctgattgctggccacacccctgcggattccacccagggt
gggttcaagggaaacaatgtgtacgggaggttttctttcaaaggaggtgcatccagtacg
gggctcatcgggggtcatgaccggtactgtggtgggggcgggggaggctcagggggggat
gatgggaacattcgctcggatgtttcggatatctctacgcacaccgtcacctacggcaac
ctggagggcaacaacaagcggcgtaagcagtacagggacagcctgaaaaagaggccagct
tcggccaagtgcagacgggagcaggacgagatagagctgagcggcctcaggaggagagcc
caccaccacaccgtccaccaccacttcccccatgggcccctggcacaccgcacggtctca
cctcccctggagcggaagaggggaggaggagggggtaattcttcaccttacatattccgc
aaagacaaagagaacctgagggatttctatgcggaccagttctgctccaaggagggcaag
gccaagtgggagcaagagggtggaaatggaggaagtggtgtgggcggtggtagtggtggt
ggtatctgtaaaagcttagtacctgtggaagacttccttaaaggtaaaggcaagaagccg
gagtgtaaaggtgggcttggctcagtgttggcagggcagcaagcccacacctgctgggat
aagggggtttctgggataggaggagggggcatagcagggggtgactgggattgtcgtaac
agccacaatgtgtgtcaccacggaggaggcggcgcttgcccaactagcggtgttgggggt
tgcaccagtcgtcccagctcagctagctgcaaacgctgtgactcctgtaagattccgcca
agcaacctttacaacatcagcgaggatatggtgtttgctggaatgaagagtagcgtagga
cccaaccaaatgctaactcaggcacagcgcaggaagctagggccaggtgggagggtgtta
cggaggcaacactcgtatgacacatttgtggatctgcagagggagggggcaagccgcatg
ggaggggctggcagtggagttgggggccagtttccccagcctcgaagtgtgagcttgaaa
gacaaagaccgcttcatggagggccccagcccttacgcacacatgtttgagaggtatgca
ggtgaaagggagtcttccatgtttggaggaataggaggggatagggcgaagggaggctcc
tctttcagtttgttccatggaggcgaaggtgggttacatcagcggtcggtgggggagaga
gacctgagggacagagatagagctatgatgggaggtgggggcggtggtggtggtggtggt
agcagcagaggggccgggacttactccttgtctaaatctctctacccagataaggtgaac
cagaaccccttcatcccagccttcggcgacgaccagtgtctattacacggcgccaaaccg
tactacgtcaaaaagccacagacgcagcagcagcagcaacttctcaacaacagccgagga
ggaggggacttccacagctccatgggagcagcttcctatttgcccgcgtccgccacagct
ggggtgatgtccaatgtggcccccaggttccccaaagagctgtgtctgggcggggtggga
gggcccatggggaaccaccacggggccagcaagctactgccagtgggcagggacacgtta
ggtttggggcagggacagagatccttcaacggtgccagcaatggacacgtctatgaaaag
ctctctagcattgagtcagacgtctga
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