Etheostoma spectabile (orangethroat darter): 116706990
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Entry
116706990 CDS
T08457
Symbol
poln
Name
(RefSeq) DNA polymerase nu isoform X1
KO
K16618
DNA polymerase nu [EC:
2.7.7.7
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
116706990 (poln)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
esp03400
]
116706990 (poln)
Enzymes [BR:
esp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
116706990 (poln)
DNA repair and recombination proteins [BR:
esp03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
A-family DNA polymerase
116706990 (poln)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_P_Exo
Motif
Other DBs
NCBI-GeneID:
116706990
NCBI-ProteinID:
XP_032399976
LinkDB
All DBs
Position
19:complement(13173220..13250730)
Genome browser
AA seq
1493 aa
AA seq
DB search
MAQSNSRLYSGPLSQAAQKILVVLRAQSGHAARRNHNYYYDHRQIEERDNGSQWEPWAQS
SWNLSQQENKEGGTDRPQVPSFSTSYNDASNQWQSSQTSACYQYSQTPDCSLSSQASSCW
DSSLQRQTSQTEAYYRCSQVYSHRKYSEPPACQSSQALSFTQQEETAASLSNRDRYTLSL
QIPKTLYEHQATPWRSSTEEIRPHFTLNLSPDKKDHDIVLFSPTNYPDTHKAEPALACHK
VSSFLKISEETENETSGAQKENRNAESLDSLAKWKLHQFNPTKEVISGEEDGGILYHQSE
EGVQQIVDSKNMWVGAAEISDQGHEMHDGATDQEARHWDAPLPHEKGSANEIQEFQFLGT
NENTSLERNLNLVFTSKKDKSFHCYSEVAKSGQKEHNDFDYIVNTHEIKVEHSPSIEDKE
ISVGGLPGTPKKILTSSEKGEHKWGHCQAESPQDVSQTATETVEKDMTENRPLFLGDNTA
DNRERTKEEGIEVMEVDLEVQKESSAVVDSSIEDKIETEQHHCSDVQIRQSQCETDYRGV
NELPGGDIEPGEKGGDRNEYVMPPVDSENASTSTEDLGRESSPTPPLSQKCSAKRLKFRA
PCLLGNHQHHGNVQTAIGNVRGISSTEILASTCSFAAGQNSFSAQDLISTTTKPSKKLGN
SHLPTSETHSCHPPLIPSFPLKRKLEVLKRQYADPPKIYIIRHPPKWEPPYSSQEKAGEV
EGNELKRAKPGTSIPELPAVIPKPQTEVSPLHKTGKVLGVHKDPYGPKQVRQIPKSARKT
SKQTPSSVTSKPLKRAKSGPDEKIHGPKLSHNEANGNEPQNQPKAGCLTATLTSDPRVKD
SCKMKPDEKMQMLEEVGKTKALVLTLVYRDGTTQLDLEQKLTQAVCGLLILMKNSLDRSI
PEDTLGPNDSLVYLKLEHTPAWAQQHKHQSQELFTRDILLQVLSKSQLVVCYKAKDLLRT
ALQFYRRDLSWKQVAGCHIQDPQVSGWLLDPTNPSSCYPDLLNKHNKRPHTTPALGTKKV
SQVITGLYSLYCLNMKLCFKLQSQGLWELYSDMELNMISVLAAMESHHIHVDKEALKRTS
DLLGAKMKQLEQEAHRAAGEIFMVTSNTQLRTVLFEKLCLHKRCENKKLPKTINKQQQST
SEAALLQLQDLHPLPKIILEYRQVHKIKSTFVDGILSCMMSKNYVSSTWYQTSSVTGRIS
AKHPNFQALPRQPLQITKKQYIEGKEKEVVTVHPRAMFIPQEGWTFLAADFCQVELRLLA
HLSSDPELLRIFTNPQADVFTMLASQWKGVSEGEVTSEDREHAKRIVYSVVYGAGRERLS
GILGVSTEQASRFQDSFLQTYREVHAFIQRTIQQCHKQGYVLSIMGRRRTFPNINAPDWG
IRMQAERQAVNFVVQGSAADLCKMAMIRIFNLVSSSSSCSARLIAQLHDELLYEVEDSQV
EQFADLVRSTMESLQHIDHLGVHLKVPLKVAVSSGKSWGSMSELNIPPKSPSL
NT seq
4482 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagtctaacagcaggttgtattcagggcctctgtcccaggcggcacagaagatc
ctggtggttctgcgggcccagagtggacatgcagccagacgcaaccacaactactactac
gatcacaggcaaatagaggagcgggataatggcagccagtgggagccgtgggctcagagc
agctggaacttgagtcagcaagagaacaaagagggaggcacagaccggccccaggtgccc
tccttttccacttcttacaatgacgcctctaaccagtggcagagctctcagacctcagcc
tgctatcagtactcacagacaccagactgctccctgtcatcccaggcctcctcctgctgg
gattcctcacttcaaaggcagacgtctcagactgaagcctattatcggtgctcacaggtt
tattcccacagaaagtactccgaaccccctgcttgccagtccagtcaggctctgtcattc
actcagcaagaggagacggcagcatctctctccaatagagacagatacaccctctccctc
caaataccaaagacactttatgaacatcaagctacaccatggagaagctccactgaagaa
atcaggccacatttcaccctcaatctttctccagacaagaaggatcatgatatagttttg
ttctccccaaccaattaccctgatacccacaaagctgagcctgctttggcttgtcacaaa
gtttcttctttccttaaaataagtgaagagacagaaaatgaaacatcaggtgcacagaaa
gaaaacagaaatgcagagagcttggacagcctagcaaagtggaagctacatcaattcaac
cccactaaagaggtcatcagtggagaagaggatgggggcatactatatcaccaatcagag
gaaggggttcagcaaatagtggattccaaaaatatgtgggtaggtgcagcagaaatctca
gaccaaggacatgaaatgcatgatggagcaactgatcaggaggcaagacactgggatgca
cccttgccacatgagaaaggatcagccaatgaaatacaagaatttcaattcttgggaacc
aatgagaacactagtttagagagaaatttgaacttggtatttacaagtaaaaaggacaaa
agcttccattgttattctgaggttgcaaagtctgggcagaaagaacataatgactttgat
tatatagttaatacacatgaaatcaaagttgaacattcacctagcattgaggataaagag
atttcagtgggaggtcttccgggcactccaaaaaagatcttgacatcttcagaaaaggga
gagcacaagtggggccactgccaagctgaaagccctcaggatgtgagtcagactgcaact
gaaacagtagagaaggacatgacagaaaaccgaccattatttctgggggacaacactgct
gataaccgggagagaaccaaagaggaaggaatagaagtaatggaggttgatttggaagtg
cagaaagagagcagtgcagtcgttgattcaagcattgaagataaaattgaaacagagcaa
caccattgttctgatgtccaaataagacaaagccagtgtgagacagattatagaggggtc
aatgagttacctggaggagacattgagccaggagagaaggggggagatagaaacgagtat
gtgatgccacctgtggacagcgaaaatgcaagtacatctacagaggatttgggtagagaa
agttctcccacgccaccattgtcccagaagtgcagtgcaaaaaggttaaagttcagagct
ccctgtctccttgggaaccaccagcaccatggcaatgtacaaactgctattggaaatgtc
agagggatcagctcaaccgagatactggcctcaacatgcagttttgctgctggacaaaat
tccttctcagcacaagacttgatctcaactaccacaaaaccaagcaaaaaactgggaaac
agccacctacctacatccgaaactcattcatgtcatcctccccttatcccctccttcccc
ttaaagaggaagcttgaagtacttaagcgacaatatgctgaccctcctaaaatctacata
atcagacatcctccaaaatgggagcctccttattcctctcaagaaaaggcaggggaagta
gagggaaatgagctgaagagagccaagcctgggacctcaatccctgaacttccagctgta
atcccaaaaccacagacggaagtcagtcctttacataaaacaggaaaagtgttaggggta
cataaagacccatatggcccaaagcaagttcgacaaatccctaaatcagctaggaaaact
tccaaacagaccccatcttctgtgacctccaaaccactcaagcgggccaaaagtgggcct
gatgagaaaatacatgggccaaagttatcccacaacgaggctaatggtaatgagccccag
aaccaacccaaagctggctgtctgactgcaaccctgacgtctgatcctagagtaaaggat
tcttgtaaaatgaaaccagatgagaagatgcaaatgcttgaggaggtgggaaagaccaag
gcgctggtgctaaccttggtgtatcgagatggaacaactcagctagacctagaacagaag
ctcactcaagcagtgtgtggccttctcatactgatgaagaacagtcttgaccgcagcata
ccagaggacacgctcgggcctaatgacagtctggtctacttaaaactagagcacacacct
gcatgggcccagcaacacaaacaccagagccaggagctctttactagagatatattgcta
caggtgctatcaaaatcccaactggtggtgtgctataaagccaaggatttacttcgtaca
gctctgcagttttacagacgagacctcagctggaaacaagtggcaggctgccatatccag
gacccacaggtgtcagggtggcttctggatcctacaaatccctcctcctgctacccggac
cttctcaataaacacaataaaagaccccatacaacacctgccctgggtaccaagaaggtt
tctcaggtcatcacaggtctctattcactctactgtcttaacatgaagctatgctttaaa
ctacagagccaggggctgtgggagctgtactcagacatggagcttaacatgatctctgtt
ttggcagccatggagagccatcacatccatgtggacaaagaagctcttaagagaacttca
gacctgctgggggctaagatgaagcagttagagcaggaggcccaccgagcagctggagaa
atattcatggtcaccagcaacactcaactacgaacagtcctgtttgagaagctgtgcctc
cataagcgttgtgagaacaagaaacttcccaagactatcaacaaacaacagcagtcgaca
tcagaagctgcattgttgcagcttcaggacctgcaccctctgccaaagatcattctagag
tacagacaggttcacaaaatcaagtccacttttgttgatgggattctctcatgcatgatg
agcaagaactacgtttcctctacgtggtaccaaacaagttcggtgacagggagaatctca
gccaagcatccaaacttccaagccctcccaagacagccacttcaaatcaccaagaagcag
tacatcgaaggaaaggagaaggaagtggtgactgttcatcctcgggcaatgtttatccct
caggaaggatggacttttcttgctgcagacttctgccaggtggagctgcgtctgttggct
cacctttcctctgaccctgagctgctccgcattttcaccaacccacaggcggacgtcttt
accatgttggcctctcagtggaaaggggtcagcgagggggaggtgacttctgaggatcgg
gaacatgccaaacgcattgtctactctgttgtgtacggggcaggtcgtgagcgtttgtcg
gggatcctcggtgtgagcacggagcaggccagccgattccaggacagcttcctgcagacc
tacagagaagtccatgccttcatccagaggaccatccagcagtgccacaaacaagggtat
gtgctctcaatcatgggtcgtcgacgcaccttccctaacattaacgcccccgattggggc
atccgcatgcaggctgagaggcaggcagtcaactttgtggtccaaggttctgctgctgat
ctttgtaagatggccatgatcagaatcttcaacctggtctcctcttccagctcatgctct
gccaggctgatagcacagctccatgatgagcttctgtatgaagtggaggactcccaggtg
gaacagtttgcagatctggtgaggagcaccatggagtcccttcagcacatagaccacctg
ggggtccatcttaaagtccccctgaaggtggcagtctccagtggcaagtcttggggatcc
atgtctgagcttaacatccctccaaagtctccttctctttaa
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integrated database retrieval system
