Enterococcus silesiacus: ATZ33_05185
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Entry
ATZ33_05185 CDS
T04218
Symbol
polC
Name
(GenBank) DNA polymerase III subunit alpha
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
ess
Enterococcus silesiacus
Pathway
ess03030
DNA replication
ess03430
Mismatch repair
ess03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ess00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ATZ33_05185 (polC)
03430 Mismatch repair
ATZ33_05185 (polC)
03440 Homologous recombination
ATZ33_05185 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ess03032
]
ATZ33_05185 (polC)
03400 DNA repair and recombination proteins [BR:
ess03400
]
ATZ33_05185 (polC)
Enzymes [BR:
ess01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ATZ33_05185 (polC)
DNA replication proteins [BR:
ess03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ATZ33_05185 (polC)
DNA repair and recombination proteins [BR:
ess03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ATZ33_05185 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
DNA_pol3_finger
PHP
DNA_pol3_a_NII
DNA_pol3_a_NI
tRNA_anti-codon
HHH_6
RNase_H_2
DNA_pol_A_exo1
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
ALS00782
LinkDB
All DBs
Position
complement(1121847..1126199)
Genome browser
AA seq
1450 aa
AA seq
DB search
MAEKAQELFAKLIDQIQLNEQERQHPLIQQGRIDKVVVHQQSRLWEFHLGFTEILPVMLY
QSFIQQLELSFQQIAGVTVKISADKSEFTEEQLTDYWQLALLNSQCDTPLVQRVIKTQTP
IIEDKKIILPVDNEAVIPYLKQQYLPIIEDLYINYGFQKFHIEPKMDEQQAKRVLALFEE
RKQEQDAAFQQQAAESLIKHEQKKKQQQQQGPALEGPIRLGRNIPNDEPIMAMGDILEEE
RRVTIEGFVFDVEVRELRSKRKILILKITDYTSSFIVKKFSNGEKDEQVFDAIQKHSWIR
VRGSIQEDTFMRDLVMNCQDLMEVKHAPRKDYAPEGDKRVELHLHSNMSTMDATNNVADY
VAQAGKWGHKAIAITDHGGAQGFPDAHSAGKKAGVKILYGVEANVVDDGVPIAYNEAHIE
LSEATYVVFDVETTGLSAVYDTIIELAAVKMHKGNIIETFEEFIDPGHPLSQTTINLTGI
TDEMVRGSKSEEEVLRLFREFSEDTILVAHNASFDMGFLNTSYGKYDIPEAENPVIDTLE
LSRYLNPTFKSHRLNTLSKKFGVNLEQHHRAIYDSESTGHLCWIFLKDAKENHNMNYHDE
LNMHIGEGDSYKRARPFHATILATTQAGLKNLFKLISMSNINYFFRIPRIPRSQLNKLRE
GLIIGSACSSGEIFEAMMQKGVEEAKNRAKFYDYIEVMPKAVYAPLLEQELVKSEADLEE
IIANLVKIGDELEKPVVATGNVHYLNEEDSIYRKILVGSMGGANPLNRHSLPEVHFRTTD
EMLTAFQFLGEETAHRLVVENPNAIADMCEEITPVKDDLYTPKIPGSEDEIRNLSYTRAK
ELYGDPLPDIVEKRLKKELDSIIGNGFSVIYLISQKLVHKSMEDGYLVGSRGSVGSSFVA
TMTGITEVNPLAPHYHCINCKHSEFFEDGSYGSGFDMPEKNCPNCGQRLFKDGHDIPFET
FLGFHGDKVPDIDLNFSGDYQAEAHNYTKVLFGEEYVYRAGTIGTVADKTAYGYVKGYER
DHNLHFRGAEVDRLAKGSTGVKRTTGQHPGGIIVIPDYMDVYDFTPIQYPADDQNSEWKT
THFDFHSIHDNILKLDILGHDDPTVIRMLQDLSGIDPKTIPTDDSEMMRIFAGPEVLGVT
PEQIYSKTGTLGIPEFGTRFVRGMLEETHPSTFAELLQISGLSHGTDVWLGNAEELIRRG
EANLAEVIGCRDDIMVYLIHAGLDSGMAFKIMETVRKGLWNKIPDELRDEYLTAMKENNV
PDWYIDSCSKIKYMFPKAHAAAYVLMALRVAYFKVYFPILYYCAYFSVRADDFDLVAMSQ
GKEAVKARMKEIQDKGLEASTKEKNLLTVLELANEMIERGFKFGMIDLYKSDAENFVIDG
DTLIAPFRAVPSLGLNVAKSIVEARAEPFLSKEDLASRGKVSKTLIEYMTENGVLKDLPD
ENQLSLFDML
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
gtggcagagaaggcacaagaattatttgcaaagttgatcgatcaaattcaattaaatgaa
caagagcggcagcatccgctcattcaacaaggaagaattgacaaagtagtggtgcatcaa
caaagccgtttatgggaatttcatttaggtttcactgagattttgcctgtgatgctttat
cagtcatttattcagcaattggagctttcttttcagcaaatcgctggtgtgactgtaaaa
atatcagctgacaaaagtgaatttacagaagaacaattgaccgattattggcaactagca
ctattgaatagtcagtgtgatactccgctagttcaacgcgtgatcaaaacgcaaacgcca
attattgaagataaaaaaattattttaccggttgataacgaagcggttattccttatttg
aaacaacagtatttaccgattattgaagatctatatatcaattatggctttcaaaaattc
catatcgaacctaaaatggatgaacagcaagcaaaacgagtattggcactgtttgaagaa
cgtaagcaagaacaagatgcggctttccagcaacaagcagcagaatcgctcattaaacat
gaacaaaagaaaaaacaacagcaacagcaaggtccggcacttgaaggtcccatccgcctt
ggccgtaatattccaaatgatgaaccgatcatggcaatgggggatatcttagaagaagaa
cgtcgagtgacaattgaaggcttcgtttttgatgtagaagtgcgggaattacgttccaaa
cgaaaaattttaattttgaagattacggattatacgtcatcttttatcgtaaaaaaattc
tcaaacggagaaaaagacgagcaagtgttcgatgcgattcaaaaacatagctggattcgt
gttcgcggcagcatccaagaagatacattcatgcgtgatttagtgatgaactgtcaagat
ttgatggaagtcaaacatgcgccgcgtaaagattatgcgccagaaggggataagcgtgta
gagctacatttacacagcaatatgagtacaatggatgcgacaaacaacgttgctgactac
gttgctcaagctggaaaatggggccacaaagccattgctatcactgatcatggcggagca
caaggatttcccgatgcgcatagtgctggaaaaaaagcaggagtcaagattttatatggt
gtagaagccaatgtcgtagatgatggtgtgccaattgcgtataatgaagcgcatatcgaa
ttaagtgaagcgacttatgtagtatttgacgtggaaacaacggggttatcagctgtatat
gatacgatcattgaactggctgctgttaaaatgcacaaaggaaatattattgagaccttc
gaagaattcatcgatccaggtcatcccttatctcaaacaacaatcaacttgacggggatc
acagatgagatggttcgcggatctaaatcagaagaagaagtattacgcttgtttagagag
ttttctgaagatacgattttagttgcgcacaatgcttcctttgatatgggtttcttaaat
actagctatggaaaatatgacattccagaagctgaaaatccagtaatcgatacattggaa
ttatctcgttatttaaatccaacgttcaagagtcatcgactaaataccttatctaaaaaa
ttcggtgttaacttggagcaacatcaccgagcaatttatgattctgaatcaactgggcat
ttatgttggatctttttgaaagacgcaaaagaaaatcataatatgaactatcatgatgaa
ttgaacatgcacattggcgaaggggattcatacaagcgtgcgagaccgtttcatgcaact
attttggcaacgactcaagctggcttgaaaaatctctttaagctgatttcaatgtcgaat
atcaattattttttcagaatccccagaattccacgctctcaactaaataaattgcgtgag
ggtttgattattgggtcggcctgttcaagtggtgagatttttgaagcgatgatgcaaaaa
ggtgtagaagaggcaaaaaatcgagcgaagttttatgattatattgaagtcatgccaaaa
gcggtctatgcaccattgttggaacaagaattggtgaaaagtgaagccgacttagaagaa
atcatcgcaaatctagtgaaaatcggagatgagctggaaaaaccagtagtcgcaaccgga
aacgttcactatttaaacgaagaagatagcatctatcggaaaattttggtagggtcgatg
ggtggagctaatccattgaatcgccacagcctgcctgaagttcactttagaacaacagac
gaaatgttaacagcctttcagtttttaggcgaagaaacggctcatcggcttgttgtggaa
aaccctaatgcaattgctgatatgtgtgaggaaatcacgcctgttaaagatgatctatat
acgccgaaaattcctggttcagaagatgaaatcagaaatttaagctacactcgtgccaaa
gaactttatggtgatccattaccagatatagttgagaaacgattgaaaaaagaattggat
agtattatcggaaatggcttttcggttatctatttgatttcgcaaaaattagtgcataaa
agtatggaggatggctatttagttggttccaggggttctgtaggttcaagttttgtagct
acaatgaccgggattactgaggttaatccgttggcaccgcattaccattgcattaattgc
aagcattctgagttttttgaagatggatcatacggttcaggttttgatatgcctgagaag
aattgcccaaattgtggtcagcgtttatttaaagatggtcacgatattccttttgaaacc
tttttaggtttccatggcgataaagtacctgatattgatttgaatttctctggtgattat
caagcagaagcccataactatacgaaagtcttgtttggtgaggagtatgtctatcgtgca
ggaacaattggtacagtcgcagataaaacggcttacggttatgtaaaggggtatgagcgc
gatcacaatcttcattttagaggagctgaggtggatcgtttagccaaaggttcgactggt
gtgaagcggacgaccggtcagcatcccggaggaatcatcgttattcctgattatatggat
gtttatgattttactccgatccaatatccggcggatgatcaaaattctgaatggaaaacg
actcactttgatttccattcaattcatgataatattttaaaacttgatatcctagggcat
gatgacccaactgttattcggatgttgcaagatttatcaggaattgatcccaaaaccatt
cccactgatgattctgagatgatgaggattttcgcaggtcctgaagttctaggtgtaaca
ccagaacaaatatattctaagactggaacattggggattccagagtttggtacacgtttt
gtccgaggcatgttggaagagacacatccgtcgacctttgctgagttattgcaaatatca
gggctgtctcatggtacggatgtttggctgggtaatgcggaagaattgattcgtcgagga
gaagccaatcttgctgaagtgattggttgtcgggatgatatcatggtttacttgattcat
gctggacttgatagtggtatggcatttaaaatcatggaaacagtgcgaaaaggactttgg
aataaaattcctgatgagttaagagatgaatatttgacagcgatgaaagagaataatgtg
ccagattggtatatcgattcttgttcaaaaataaaatatatgttcccgaaagcccatgcg
gcagcttacgttttaatggctttgcgagttgcctactttaaagtgtattttccaattctt
tattactgcgcatacttttctgtccgtgcagatgactttgatttagttgcgatgtcacaa
ggaaaagaagcggtgaaagcgcgtatgaaagagattcaggataaaggtctggaagcttcg
actaaagaaaaaaatctgttgactgttttggaacttgcgaatgaaatgatcgagcgaggc
tttaaattcggtatgatcgatttgtataaatcggatgcagaaaattttgtaattgatggt
gacacgttgattgctccgtttagagctgttcccagtctaggtctcaacgtggctaaatca
atcgttgaagccagagcagaaccgttcttgtctaaggaagatcttgctagtcgcggtaaa
gtttcaaaaacattgattgagtatatgactgaaaatggtgttttgaaagacttacctgat
gaaaatcaactgtcattgtttgatatgctttaa
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integrated database retrieval system
