Escherichia sp. E4742: FEM44_10960
Help
Entry
FEM44_10960 CDS
T06276
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
esz
Escherichia sp. E4742
Pathway
esz00540
Lipopolysaccharide biosynthesis
esz01100
Metabolic pathways
esz01250
Biosynthesis of nucleotide sugars
Module
esz_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
esz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
FEM44_10960 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
esz01005
]
FEM44_10960 (rfaD)
Enzymes [BR:
esz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
FEM44_10960 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
esz01005
]
Core region
FEM44_10960 (rfaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
adh_short
Motif
Other DBs
NCBI-ProteinID:
QCT87677
LinkDB
All DBs
Position
complement(2239456..2240388)
Genome browser
AA seq
310 aa
AA seq
DB search
MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQI
MAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATY
GGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGS
MASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGVSGIFNLGTGRA
ESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVT
EYMAWLNRDA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgttaccggcggcgcgggctttatcggcagcaacatcgttaaggccctgaat
gataaaggcatcaccgatattctggtggtggacaacctgaaagacggcaccaagtttgtg
aacctggtggacctgaacatcgcggactatatggataaggaagacttcctgatccagatt
atggcgggcgaagagttcggcgatgtcgaagcgattttccacgaaggcgcgtgctcttcc
actaccgagtgggacggcaagtatatgatggataacaactatcaatactccaaagagctg
ctgcactactgtctggagcgcgaaatcccgttcctgtacgcctcttccgcagccacttac
ggtggccgcacctccgactttattgaatcccgcgaatacgaaaaaccactgaacgtatac
ggttattcgaagttcctgtttgatgaatatgttcgtcaaatcctgcctgaagcgaactcg
cagattgttggcttccgctatttcaacgtttatggaccgcgtgaaggccataaaggcagc
atggcgagcgtcgctttccatctcaacacgcaacttaacaacggtgaatcaccgaaactg
ttcgaaggtagcgagaactttaaacgcgacttcgtctacgtgggcgacgtggctgatgtg
aatctgtggttcctggaaaatggcgtttccggcatcttcaacctcggtactggtcgtgcg
gaatccttccaggcagtagccgacgcaacgcttgcttatcacaagaaaggtcagatcgaa
tacattccgttcccggataaactgaaaggccgctatcaggcgtttactcaggcggatctg
actaatctacgcgctgcgggttacgacaaaccgttcaaaaccgttgccgaaggtgtaacg
gaatatatggcctggctgaatcgcgacgcataa
DBGET
integrated database retrieval system
