Echinops telfairi (small Madagascar hedgehog): 101646168
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Entry
101646168 CDS
T08707
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
101646168 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
etf03021
]
101646168 (POLR1A)
Enzymes [BR:
etf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
101646168 (POLR1A)
Transcription machinery [BR:
etf03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
101646168 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
101646168
NCBI-ProteinID:
XP_045139829
LinkDB
All DBs
Position
Unknown
AA seq
1709 aa
AA seq
DB search
MLGSKNVPWRRLQGISFGMYSAEELKKLSVKSITNPRYLDSLGNPSANGLYDLALGPADA
KEVCSTCVQDFNNCSGHLGHIDLPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAVIHLL
VSQLKVLEVGVLQAVYELEHILSRFLEENPGASAFEIQEELEQYTTQTVQNNLLGSQGAH
VKNVCESRSQLIASFWKAHMSAKRCPHCKTGRSVIRKEHNSKLTVTYPAVVHKKSGQEST
KTPEIEEAQLGKRGYLTPNSAREHLTALWENEGFFLNYLFWGLEDIGMESRFNPSTFFLD
FLVVPPSRYRPVNRLGDQMFTNGQTVNLQAVMKDIVLIRKLLALMAQDQKLPCEVAAPCE
EDKDSSAPVDRSFLSTLPGQTLTDKLYNIWIRLQSHVNIVFDSEMDKLMMEKYPGIRQIL
EKKDGLFRKHMMGKRVDYAARSVICPDMYISTNEIGIPMVFATKLTYPQPVTPWNVQELR
QAVINGPNVHPGASMVVNEDGSRTALSASDLSQREAVAKQLLTPATGAPKPQGTKIVCRH
VKNGDILLLNRQPTLHRPSIQAHHARILPEEKVLRLHYANCKAYNADFDGDEMNAHFPQS
ELGRAEACVLACTDQQYLVPKDGQPLAGLIQDHMVSGASMTTRGCFFAREQYMELVYRGL
TDKVGRVKTFPPAILKPRPLWTGKQVVSTLLINIIPKDYTPLNLAGKAKIGGKAWVKESP
RPVPGFNPDSMCESQVIIRGGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGKVLTCL
ARLFTAYLQLYRGFTLDVEDILVKPKADVKRHSIIEESTHCGSRAVRAALNLPDAASCED
IRGKWQDAHLGKDQRDFNMVDLKFKEEVNHYSNEINKACMPFGLHRQFPENNLQLMVQSG
AKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTGIRP
PEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYGE
DGLDIPRTQFLQPKQFPFLASNHEVIMKSKHLHEVLSRAAPKKALRHFRAIKKWQQKHPD
TLLRKSAFLSFSQSAQAAERALNLGGGNKNGRSPATHEVLRLWSELDEQSRRKYQKKAAP
CPDPSLSVWRPDIYFASVSETFEQKIDNYSREWASLAGKSGERSELSLDRLRTLLQLKWQ
RSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIKT
PMMRVPVLNTKRALKRVKSLKKQLTRVCLGEVLQKIDVQECFRMHTRQEKSRVYQLRFQF
LPRACYQQEKCLRPTDILHFMETRFFKLLMEAIKKKNNKASAFRSVNTRRATQRDLDHSG
ESGGSREQEDNEDEEGRIVDAEAEEGDADASDARLKEKQEEEVDYESEEEQEEDKDGEDE
DEDTLQEEGSGPGEGSQEGAAEVGFSPEDAAPARPWQPTPGQGTEACERRIQAVREAHPF
VEDYKYDTEEGLWCEVTVKLPLMKVSFDMSSLVVSLAHEAVVYTTKGITRCLLNETTNKE
NERELVLNTEGINLPELFKYAEVLDLRRLYSNDIHAMASTYGIEAALRVIEKEIKDVFAV
YGIAVDPRHLSLVADYMCFEGVYKPLNRFGIRSNSSPLQQMTFETSFQFLKQATMMGSHD
ELRSPSACLVVGKVVKGGTGLFELKQPLR
NT seq
5130 nt
NT seq
+upstream
nt +downstream
nt
atgttgggctccaagaacgtgccctggcggcggctgcagggcatttccttcgggatgtat
tcggctgaagagctcaagaaattaagtgttaagtccattacaaaccctcggtacttggat
agcctggggaacccatcggcgaatggcctgtatgatctagcgctgggccctgcagatgcc
aaggaggtgtgctccacctgtgtgcaggatttcaacaactgttctggtcacctgggccac
attgatctcccactcacggtgtacaaccctctccttttcgataaactctacttgctgctc
cgtggctcctgtttaaactgtcacatgctcacctgcccccgggctgtgattcacctctta
gtctctcagctgaaagttctggaagttggggtcctgcaagcagtctacgagctggagcac
atcctgagcaggtttctagaagaaaaccctggtgcttctgcctttgaaattcaggaagag
ttagaacaatacacaacccagaccgtacagaacaacctgttggggtcccagggagcacat
gtgaagaatgtgtgtgagagcaggagccagctcatcgcgtccttctggaaggcgcacatg
agcgctaagcgatgcccccactgcaagactgggcgctccgtcatccgcaaggagcacaac
agcaaactgaccgtcacgtatccagccgtggtgcacaagaagagcggccaggagagcacc
aagaccccggagatcgaggaggctcagctgggaaagcgagggtacctgacgcccaacagc
gcccgagaacacctcaccgcactctgggagaacgaagggttcttcctgaactacctcttc
tggggactggaggacattggcatggagtccagattcaatcccagcacgttctttctggat
ttcctggtggtgccgccctccaggtaccgccctgtcaaccgcctgggggaccagatgttt
accaacggccagacggtgaacctgcaggctgtcatgaaggacattgttctgatccggaag
cttctggcactgatggcccaagaccagaagctgccgtgcgaggtggctgcaccatgcgag
gaggacaaagactcctcggcgcctgtggaccgctcctttctaagcacacttccgggccag
acgctcacagacaagctgtacaacatctggatccgccttcagagccacgtcaacattgtg
tttgatagcgagatggacaagttaatgatggagaagtaccctggcatccgacagatcttg
gagaagaaggacggcctcttccggaagcacatgatggggaagcgcgtggactacgcagcc
cgctcggtcatctgcccggacatgtacatcagcaccaacgagattgggattcccatggtg
tttgccacaaaactgacctacccacagccagtgaccccatggaacgtgcaggaactgagg
caggcggtcatcaatggccccaacgtgcacccaggggcctccatggtggtcaacgaggac
ggcagccgcactgccctgagtgcctccgacctcagccagcgagaagccgtggccaagcag
ctcctgacacctgccacgggggcgccgaagccccaggggacgaaaattgtgtgccggcac
gtgaagaacggggacattctcctcctgaaccggcagcccaccctgcacaggccctccatc
caggcccaccacgcccggatcctgcctgaagagaaagtcttacggcttcactatgccaac
tgcaaggcctacaacgccgactttgacggagacgagatgaacgcccacttcccgcagagc
gagctgggccgggcggaggcttgcgtcctggcttgcaccgatcagcagtacctggttccc
aaggatggccagccgttggcaggcttgatccaggatcacatggtctcaggtgcgagcatg
accactcggggctgtttcttcgcccgggagcagtacatggagctggtgtaccgaggactc
acagacaaagtggggcgggtgaagaccttcccccctgccatcctgaagccccgtccactg
tggacaggaaagcaggttgtgtccacactgctgataaacataattcccaaagactacacc
ccactgaatttggcgggaaaggcgaagattggcgggaaagcctgggtaaaggaatctcct
cggccggttccgggattcaaccccgactctatgtgcgagtcccaggtgatcatcaggggc
ggggagctgctctgcggggttctggacaaggcacactacgggagctcggcctatggcttg
gtgcactgctgctacgagatctacgggggcgagaccagcggcaaggtcctcacctgcctg
gcccgcctcttcactgcctacctgcagctctaccgaggcttcaccttggacgtcgaagac
attttggttaagcccaaggctgacgtcaagagacatagtatcattgaagagtctacccac
tgtgggtcccgggccgtgcgggctgcgttaaacctgccagatgctgcatcgtgtgaggac
atccgagggaagtggcaggatgctcatctgggcaaggaccagcgggattttaacatggtt
gatctgaagttcaaggaggaagtgaaccattacagcaacgagattaacaaggcatgcatg
ccatttggcctacacaggcagttccctgagaacaacctgcagttgatggtgcagtctgga
gccaagggatccacggtgaacacaatgcagatctcctgcctactcggccagatcgaattg
gaaggccggaggcccccgctgatggcgtctgggaagtcactgccctgcttcgagccatat
gaattcactcccagggctggtggctttgtcaccggcaggttcctcaccggcatccggcct
cctgagttcttcttccactgcatggcggggcgggaaggcctggtggacactgccgtgaaa
accagccgctctggctacctccagaggtgcatcatcaagcacctggaaggcctggtggtc
cagtatgacctgacggtccgcgacagtgacggcagcgtggtgcagttcctctacggggag
gacggcctggacatcccccggacacagttcttgcaacccaagcagttccccttcctcgcc
agcaaccacgaggtgataatgaaatcaaaacacctccacgaggtcttatccagagcagct
cccaagaaagcactgcgccacttcagggccatcaaaaagtggcagcagaagcaccccgac
accctgctgagaaagagcgccttcctgagcttctcgcagagcgcgcaggccgccgagagg
gccctgaacctgggaggtgggaacaagaacggccgcagccctgccacccacgaggtgctg
aggctgtggtccgagttggacgagcagagccggaggaagtaccagaagaaggcagccccc
tgtcctgaccccagtctgtccgtgtggcgcccggacatctactttgcgtcggtgtcagag
acgttcgaacagaagattgacaactacagtcgagagtgggcctctctcgcagggaagagt
ggtgagagatcggagctttctctcgacaggctgaggaccctgctgcagttgaagtggcag
cgctccctgtgtgacccaggggaggctgtgggcttgctggccgcccagagcatcggggag
ccctccactcagatgaccctgaacaccttccacttcgctggcagaggcgagatgaacgtc
acgctgggtatcccaaggctgagagagatcctcatggtggccagcgccaacatcaagacg
cccatgatgagggtgcctgtgctcaacaccaagcgagccctgaagagggtgaagagcctg
aagaagcagctgaccagggtgtgcttaggggaggtgctgcagaagattgacgtgcaggag
tgcttccgtatgcacaccaggcaggagaagagccgcgtttaccagctgcgctttcagttc
ctgccacgggcctgctaccagcaggagaagtgcctgaggcccacagacatcctgcacttc
atggagaccaggttttttaagctgctgatggaagccatcaagaagaagaataacaaagcg
tctgccttccggagcgtgaacactcggagagctacccagcgggacctagaccactccggg
gagtcggggggcagtcgggagcaggaagacaatgaggacgaggaggggcgcattgtagac
gctgaagccgaggaaggggacgccgatgcctcggacgccaggctcaaggagaagcaggag
gaggaggtggattacgagagcgaggaggagcaggaggaggacaaggacggggaggacgag
gatgaggacacgctgcaggaggaagggagcggccctggcgaaggctcccaagagggggcc
gcagaggtgggcttcagccccgaggacgcagccccagcgaggccttggcagcccaccccg
ggccagggcaccgaggcctgcgagcgccgcatccaggccgtgcgcgaggcccacccgttc
gtggaagactacaagtacgacacggaggagggcctgtggtgcgaggtgacggtgaagctg
cccctgatgaaggtcagctttgacatgagctccctggtcgtgtccttggcccacgaagcc
gtggtctacacgaccaagggcatcacccgctgcctcctgaacgaaacaaccaacaaggag
aacgagagggagctggtgttgaacacggaagggatcaacctgcccgagctgttcaagtac
gccgaggtcctggacctgcgccgcctctactccaacgacatccacgccatggccagcact
tacggcatcgaggcggcgctgcgggtgatcgaaaaggagatcaaggacgtgtttgctgtg
tacggcattgcggttgatccgcgccacctctccctggtcgctgactacatgtgcttcgag
ggcgtttacaagccgctgaaccgctttgggatccggtcgaactcctcccctctgcagcag
atgacgtttgagaccagcttccagtttctgaagcaggccaccatgatgggttcccacgac
gagctgcggtccccttccgcctgcctggtggtcgggaaagtcgtgaagggcggcacaggc
ctctttgagctcaagcagccgctgagataa
DBGET
integrated database retrieval system
