Echinops telfairi (small Madagascar hedgehog): 101646584
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Entry
101646584 CDS
T08707
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf03020
RNA polymerase
etf03420
Nucleotide excision repair
etf05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
101646584 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
101646584 (POLR2B)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
101646584 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
etf03021
]
101646584 (POLR2B)
03400 DNA repair and recombination proteins [BR:
etf03400
]
101646584 (POLR2B)
Enzymes [BR:
etf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
101646584 (POLR2B)
Transcription machinery [BR:
etf03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
101646584 (POLR2B)
DNA repair and recombination proteins [BR:
etf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
101646584 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
101646584
NCBI-ProteinID:
XP_004706351
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKEVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRYTKRDCSTFLRTSE
TGIVDQVMVTFNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSEYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtatgacgcagacgaagatatgcaatatgatgaggacgatgatgaaatcacccctgat
ttatggcaagaagcatgttggattgtaatcagttcctattttgacgagaaaggcttggtc
agacaacagctggattcttttgatgagtttattcagatgtctgttcagagaattgtggaa
gatgcaccccctattgacctgcaggccgaagctcagcatgccagtggagaagtcgaagaa
ccgccaagatacttgctaaagtttgagcagatttacctctcgaagcctacccattgggaa
agagacggtgctccttcaccgatgatgccgaatgaagccagattaagaaatctcacttat
tctgctccactttacgttgacataacaaagacagtcattaaagaaggtgaagaacaactt
cagactcagcatcagaaaacctttataggaaaaattccaattatgttgcgctcaacttac
tgcctgttgaatggcttaacggaccgtgatctgtgtgagttaaatgaatgccctttggat
cctggcggctatttcattatcaatggatctgaaaaggtcctgattgctcaagagaaaatg
gcaacaaacacagtttatgtgtttgccaaaaaggattctaaatatgcctacactggcgag
tgtaggtcgtgcctagagaattcttcccggcccaccagtactatctgggttagcatgctg
gcgagaggaggacagggtgcaaaaaagagtgcaattggtcagcgcatcgtggcaactcta
ccgtacatcaagcaagaagttcccatcattattgtgttcagagcactaggctttgtgtct
gacagagacattttagagcatattatttacgattttgaagatccagagatgatggaaatg
gttaaaccttcccttgatgaagcctttgtcatccaagaacagaatgtggcactaaatttc
attggctcaagaggagcgaagcccggtgtgacaaaagagaagagaattaaatatgcaaaa
gaggtcctgcaaaaagagatgctcccccatgtgggcgtcagtgacttctgtgagaccaag
aaagcctacttcttagggtatatggttcataggttacttctggcagctttgggcaggaga
gagctggacgacagggatcactatgggaacaaaagattggatcttgctgggcctctcctg
gcgttcttatttagaggtatgtttaagaatttgcttaaagaagtgcggatctatgcacag
aaatttattgatcgaggaaaggatttcaacttggaattggcgattaaaacaagaattata
tccgatggcctaaaatactcgttagctactggaaactggggtgatcaaaagaaagctcac
caagccagagccggcgtgtcccaggtactgaaccgtctgacttttgcgtctactctttct
cacctgcgacgtttaaactctcctattggcagagatggcaagctagcaaaaccaagacag
ttgcataatacgctgtggggaatggtgtgtcctgctgagaccccagagggtcatgctgta
ggacttgtgaagaacttagctctgatggcttacatttcagttggttctcagccatctccc
attctggaatttttagaagaatggagtatggaaaacttagaagaaatttctcctgcggct
attgctgatgcaaccaagattttcgttaatggctgctgggttggcatacataaagaccct
gaacaactgatgaacaccctcaggaagctgcggcgtcagatggacatcattgtgtctgaa
gtttctatgatcagagatattcgagagagggagattcgtatctacacagatgcaggccgt
atttgtagaccacttctgattgtggagaaacaaaagctacttttgaagaagaggcatatt
gaccagttgaaagagagagagtataacaattacagctggcaagatcttgtggccagtggg
gtagtagaatatatcgataccctagaagaagaaacagtgatgcttgcaatgaccccggat
gatttacaggagaaagaagttgcatattgttccacgtacacgcattgtgagattcaccct
tcaatgatccttggtgtctgtgcatctattattccctttccagaccacaaccagtctcct
cgaaacacataccagtctgctatgggtaagcaagctatgggagtttatatcaccaatttc
cacgttcgcatggacacactcgcccacgttctctattatcctcaaaagccacttgtgacc
acacggtctatggaatatctgcgcttccgagagctgccagcaggtatcaactctattgtg
gccatcgcctcatacacagggtacaaccaggaagactcagtgatcatgaaccgttcggct
gttgaccgaggctttttcaggtctgttttctatcggtcttacaaggaacaagagtccaaa
aaaggatttgaccaagaagaagtttttgagaagcccacacgtgaaacatgccagggtatg
aggcatgccatttatgacaagctcgatgacgacggcctgatcgctcctggggttcgtgtc
tcaggagatgatgtcatcataggcaaaactgtcaccttgcctgaaaatgaagacgagttg
gagagcaccaataggcgctacaccaagcgggactgcagcaccttcctgagaacgagtgag
acgggcattgtggaccaggtgatggtgacgttcaaccaggaagggtataaattctgtaaa
ataagggtacgctctgttagaattccacaaatcggagacaagtttgctagtcgacatggt
caaaagggtacttgtggtattcagtatagacaagaggatatgccgtttacctgtgaaggc
atcacccccgatatcatcatcaatccccatgccatcccctctcggatgaccatcggtcac
ttgatcgaatgtcttcaaggcaaggtctcagcgaacaagggtgagattggtgacgccact
ccctttaatgatgcggttaacgtgcagaagatttccaaccttttatctgagtatggctac
catctccgaggaaacgaggtcctgtacaatgggttcactggccgaaagatcacatcacag
attttcatcggccccacttactaccagcgtctgaagcatatggtggatgataagattcat
tctcgtgccagagggcctattcagatcctcaatcggcagcccatggagggccggtctcgc
gatggtgggctgcggtttggagaaatggagcgagactgtcagattgcccacggagcagcc
cagttcctaagagagcggctgttcgaggcctcagacccgtatcaggtccatgtttgcaat
ctgtgtgggatcatggccattgccaacacccggacccacacctacgagtgccggggctgc
cgcaacaagacccagatttccttggtgcgaatgccctatgcgtgcaaacttctgtttcag
gaacttatgtcgatgagcattgcacctcgcatgatgagcgtttag
DBGET
integrated database retrieval system
