Echinops telfairi (small Madagascar hedgehog): 101646904
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Entry
101646904 CDS
T08707
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf04721
Synaptic vesicle cycle
etf04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
101646904 (SLC6A4)
04721 Synaptic vesicle cycle
101646904 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
etf02000
]
101646904 (SLC6A4)
Transporters [BR:
etf02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
101646904 (SLC6A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
101646904
NCBI-ProteinID:
XP_004706953
LinkDB
All DBs
Position
Unknown
AA seq
682 aa
AA seq
DB search
MPPEANFQTPGPLGAGSRRTPSHLCNAQRDPRTGNSVIPLRPLADGSGCPGLSHSMETTP
LDSQKELSAQNEGADCQENGVLRKGIPAPGDKAERGHISNGYSAVPSPGAGDDTPPAATA
ALVAEVHQGERETWGKKVDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLPYTIMAIFG
GIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTIMAWALYYLI
SSFTDQLPWTSCKNSWNTGNCTNYFSEDNVTWTLHSTSPAEEFYTRHVLQIHRSKGLQDL
GGISWQLALCIMLIFTVVYFSIWKGVKTSGKVVWVTATFPYIILSVLLVRGATLPGAWRG
VLFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQDALVTSVVN
CMTSFVSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPASTFFAIIFF
LMLITLGLDSTFAGLEGVITAVLDEFPHVWAKRREWCVLGVVVTCFFGSLATLTFGGAYV
VKLLEEYATGPAVLTVVLIEAVAVSWFYGITQFCSDVKEMLGFSPGWFWKICWVAISPLF
LLFIICSFLMSPPQLRLFQYSYPHWSVILGYCIGTSSFICIPTYITYRLITTPGTLKERI
IKGITPETPTEIPCGDIRLNAV
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgccaccagaggcaaactttcaaaccccggggccgctcggggctggcagcaggagaacg
ccatcccatctctgtaacgctcagagggaccccaggactgggaattccgtgattcccctc
aggcctctggcagatggaagcgggtgtcctggcctaagccacagcatggagaccacgccc
ttggattctcagaaggagctgtccgcccagaacgagggagcagactgtcaggaaaatggg
gtcctgcgcaaaggcatccccgccccgggcgacaaagcagagcggggccacatctccaac
gggtactccgcggtcccgagcccgggggcaggagatgacaccccgccggcagccaccgcc
gccctcgtggccgaggttcaccagggggaacgggagacctggggcaagaaggtggatttc
ctcctgtcggtcatcggctacgcggtggacctgggcaacgtgtggcgctttccctacata
tgctaccagaacggaggaggagccttcctcctcccctataccatcatggccattttcgga
gggatcccgcttttctacatggagctcgcgctgggccagtaccaccgaaatggctgcatc
tccatatggaggaaaatttgtcccatcttcaaaggcataggttacgccatctgcatcatt
gccttctacatcgcctcgtactacaacaccatcatggcctgggctctctactacctcatc
tcctccttcaccgaccagctgccctggaccagctgcaagaactcctggaacaccggcaac
tgcaccaactacttctctgaggacaacgtcacctggaccctccattccacgtcccccgct
gaagagttttacacgcgccacgtgctgcagatccaccggtcaaaggggctccaggatctg
gggggcatcagctggcagcttgccctgtgcatcatgctgatcttcactgtggtctacttc
agcatctggaaaggcgtcaaaacctcgggcaaggtggtgtgggtgacagcgacattccct
tacatcatcctctcagtcctgctggtgcgcggagccaccctccctggagcctggcggggt
gtcctcttttacctgaaacccaactggcagaaactcttggaaacgggggtgtgggtggac
gctgcggctcagattttcttctctctcggtcctggctttggggtcctactggcttttgct
agctacaacaaattcaacaacaactgctatcaagatgccctggtgaccagtgtggtgaac
tgcatgaccagcttcgtttcgggatttgtcatcttcacagtgctcgggtacatggctgag
atgaggaacgaggatgtgtccgaggtggccaaagatgcaggccccagcctcctcttcatc
acctatgccgaagccatcgccaacatgccggcatccacattcttcgccatcatcttcttc
ctgatgttgatcacactgggcttggacagcacgtttgcaggcttggagggagtgatcacg
gcggtgctggatgagttcccacatgtctgggccaagcgcagggagtggtgcgtgcttggc
gtggtcgtcacctgcttcttcggatccctggccaccctgacctttggaggggcctacgtg
gtgaagctgctggaggaatatgccacgggacccgcggtcctcacggtggtgctcatagaa
gcggtggccgtgtcttggttctacggcatcactcagttctgcagcgacgtgaaggaaatg
cttggcttcagccctggatggttttggaagatctgctgggtggccatcagccctctgttt
ctcctgttcatcatttgtagtttcctgatgagccccccgcagctgcggcttttccagtat
agttacccgcactggagcgtcatcctgggctactgtatagggacctcgtctttcatctgc
atcccaacgtatatcacttaccggctcatcaccactcctgggacccttaaggagcgtatt
attaaaggtatcactccagaaacaccgacagaaattccctgtggggacatccgcttgaat
gctgtgtaa
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