Empidonax traillii (willow flycatcher): 114056780
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Entry
114056780 CDS
T05887
Name
(RefSeq) laminin subunit beta-2-like isoform X1
KO
K06243
laminin, beta 2
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04510
Focal adhesion
etl04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114056780
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
114056780
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
F5_F8_type_C
LegC3_N
COG6_N
BRE1
Motif
Other DBs
NCBI-GeneID:
114056780
NCBI-ProteinID:
XP_027738058
LinkDB
All DBs
Position
Unknown
AA seq
1856 aa
AA seq
DB search
MLSCTLHPAAVPSPCPPRLILWLPMDLLVLALLLAGGLAVGGWQEPDLSHGCTRGSCYPA
TGNLLVGRAALLSATSTCGLDGPQEYCIVSHLQDSEKCFTCDSRDPSLPESHRIENVIYL
SGPHDQRTWWQSENGVEHVSIRLDLEGEFHFTHLIMKFKTFRPAAMLVERSADFGRTWKV
YRYFAYNCSKLFPGIPNQPSGLVDEVLCDQRYSEIEPSSRGEVIFKVLDPSIPVADPYSP
DIQDLLRVTNLRVNLTKLHTLGDNLLDSRREVLHKYYYAVDELVLRGSCFCHGHAAHCAP
APGAPTPSVPGMIHGRCVCEHHTQGLNCERCEDFYHDLPWRPAEGSSTNACRRCDCNEHS
QRCHFDMAVFLATGNTSGAVCDDCQHNTMGRRCHLCKPFYYRHPRSDIRAPTACAPCDCD
PAGSLDGGACDGHTDVALGMIAGQCRCKENVAGPRCDRCRHGAYGLSLGDPLGCQPCRCD
PRGTVMGSSPCDPISGDCYCKRFVAGRSCSQCVPEFWGLSYDLGGCRPCACDFGGAYSNR
CSMEDGACPCRPHIMGRQCDQVQPGFFCAPLDYYTYEAEQATSHGHSHPQLPGAIRAEVP
QDCLEYNTRESRGRKGRSRHQRSSPHAPQLRVPMRRSRQQPPKPDVEEVVRDGAGHMVTW
TGSGFARVRDGAGLTFRMDNVPYPMDYELLIRYEPESAEDWEVVVSVSSRVLPTSPRCGN
LLPSEQMYRESLPHSQRYVLLSRPFCFEPSTPYEVTMRLQRAGVTQRHPGAFILIDSLVL
LPRVLELPGFHGAEAAARQEELERYRCLEVFHMAPPHPLAQACARLVCSVSALMHGGALP
CQCDPQGSRSSECQVQGGQCECKPHVIGRRCDRCTPGSYGFGPQGCSPCACSPEGSLSQL
CDAVSGQCQCQPGAVGRQCDQCQPGHWGFPACRPCQCNGHAEECDPRTGTCLRCRDHTDG
RHCERCQDGYYGNPVLGSGQQCRPCPCPGYPGTRHYHGTACHADEETHHIVCLCAPGYAG
PRCDRCSPGYFGAPEVEGGVCRPCQCNNNIDASDPGGCDPRTGQCLRCLYHTAGPHCAQC
QPGYYGNALQRSCRRCGCDPRGTLASHCANGTCTCDRGTGACACRPNVVGKICDRCAPQF
WSLGDPGGCEPCDCHPIHALHPACDTVTGQCQCRPGFGGRVCSQCQEHHWGDPEQECRAC
ECEPLGAESPQCEQDSGQCQCRLGFGGLHCDRCQRGYREPFPYCSPCHPCFGRWDPAVGS
LRDRLRRLGAQVQALREGGSTLPLSPRRLRELEESLGRVERLLGEGDNPSSPLLNGLPGQ
LDGTRMELDNFWRHLQELEQHLDQLAQADVRHHDRLAGLSHKLGGLNRTTSHLQILLGTV
ATTGFSESYRSILASAEVSRQAEVVANGTASELSRSQATRRAAERALRQRGNAFRRGTAA
ARKSLREAQKRVMGLSIARINEKICGAPGDQSCKHAPCGGALCRDSEGTRRCGGMGCAGA
LPISARALSSARNASQQLEVALGQLGVVAQKPGAPQMQEVQELARGARSWAEEALGRSQA
ARSRAEKATAQLRDFIRRIKAFLAEEGADPGSIELVARQVLNISLPSSPSRIQELLWEMR
ESISQLEGVDAVLNGTAKGLAMAQGLLAQGQEARERAEGVRDELVETQQALEVARAQATA
AGSALQSARNAIRAAENKAREAERKLQALDGKESRAQRRLRELAQRVATLQERGRDVRHK
AQQAKDGAQRATTTSGTLSQDLAHVTQRYVLLKNRVRVLDGVSDGALQRVTQLTVEARNL
LDKASNSKRKLEDLEQRFGANERAMAAKVTRLQELEQQVSGLLQEIRERANAYATC
NT seq
5571 nt
NT seq
+upstream
nt +downstream
nt
atgctaagctgtaccctgcaccctgcagcagtgccatctccgtgtccccccaggttgatc
ctgtggctgcccatggacctcctggtgcttgccctcctcctggcagggggactggcagta
gggggctggcaggaacctgacctgagccatggctgcactcgcggcagctgctacccagcc
actgggaatttgctggtgggccgagctgccctcctgagtgccacctccacctgcgggctg
gatgggccccaggagtactgcatcgtcagccacctccaggactcagagaaatgcttcacc
tgtgactcacgggacccatccctgcctgagagccaccgcattgagaacgtcatctacctg
agcggcccccacgaccagcggacctggtggcaatcagagaatggcgttgagcatgtcagc
atccgcctggacctggagggcgagttccacttcacccacctcatcatgaagtttaagacc
ttccgccctgcggccatgctggtggagcgttcagccgactttggacgcacctggaaggtc
tatcgctactttgcctacaactgctccaagctcttccctggcatccccaaccagccctca
gggcttgtggacgaggtgctgtgtgaccagcgctactctgagattgagccctccagccgc
ggggaggtcatcttcaaggtgctggacccctccatccctgtggcagatccctacagcccg
gacatccaggacctgctgcgcgtcaccaacctgcgggtgaacctcaccaagctgcacacg
ctgggggacaacctgctggactcgcggcgggaggtgctgcacaagtactactatgctgtg
gatgagctggtgctgcgtgggagctgcttctgccatggccacgctgcccactgtgccccg
gcacctggtgctccaacgccctccgtccctggcatgatccacgggcgctgtgtctgcgag
catcacacacaggggctgaactgcgagcgctgcgaggacttctaccacgacctgccctgg
cgcccggccgagggctccagcaccaacgcctgtcgccgctgtgactgcaacgagcactcg
cagcggtgccacttcgacatggccgtgttcctggccacggggaacaccagtggggccgtg
tgtgacgactgccagcacaacaccatgggccgccgctgccacctctgcaaacccttctac
taccggcaccctcgctccgacatccgtgctcccactgcctgtgccccgtgtgattgtgac
ccggcgggctcgctggacggaggcgcctgcgacgggcacacagatgtggcgctgggaatg
atcgcggggcagtgccgctgcaaggagaatgtggctggtccccgctgtgaccgctgccgg
cacggtgcctatggcctgagccttggagacccactgggctgccagccgtgccggtgtgac
ccgaggggcacggtgatgggcagctctccatgcgaccccatcagtggggattgctactgc
aaacgcttcgtggccgggcgctcctgcagccagtgtgtgcctgagttctggggactgagc
tacgacctggggggctgccggccctgtgcctgtgacttcgggggagcctacagcaaccgg
tgctccatggaggatggggcttgtccctgccgtccccacatcatggggcggcagtgtgac
caggtacaacctggcttcttctgcgcccccctcgactactacacctacgaggctgagcag
gccaccagccatggccacagccacccccagctcccgggtgccatccgggcagaggtgccc
caggactgcctggagtacaacactagggagtcaagggggcggaagggacgctcacggcac
cagcgcagctccccccatgccccccagctccgcgtccccatgcgccgcagccgccagcag
ccccccaagccggacgtggaggaggtggtgcgggacggtgccgggcacatggtgacgtgg
acaggctcggggttcgcccgggtgcgggacggggctggcctgaccttccgcatggacaac
gtgccctaccccatggactacgagctgctcatccgctatgagcctgagtcagctgaggac
tgggaggtcgtggtcagtgtcagctcccgggtgctgcccaccagccctcgctgcgggaac
ctgctgccctccgagcagatgtaccgtgagagcctgccccacagccagaggtatgtgctg
ctgtcccggcccttctgcttcgagcccagcaccccctatgaggtgaccatgcggcttcaa
cgggctggtgtcacccagcgtcaccccggcgccttcatcctcatcgactcgttggtgctc
ctgccacgggtgttggagttgccaggtttccacggggcagaggcggcagcgcgccaggag
gagctggagcggtaccggtgcctggaggtgtttcacatggcccccccacaccccctggcc
caggcctgtgcccgcctggtctgcagcgtctcagccctgatgcacggcggggcactgccc
tgccagtgcgacccacagggctcccggagcagcgagtgccaggtccagggtgggcagtgc
gagtgcaagccccacgtcatcggccgacgctgcgatcgctgcacccccggcagctatggc
tttgggccccagggatgcagcccctgtgcctgctccccggagggctcgttgtcccagctg
tgtgacgcagtgagcgggcagtgccagtgccagcctggcgccgtgggccggcagtgtgac
caatgccagcccggccactggggcttccctgcctgccggccctgccagtgcaacgggcac
gctgaggagtgcgatccccgcacgggcacctgcctgcgctgccgcgaccacacggacgga
cggcactgcgagaggtgccaggatggttactacgggaaccccgtgctgggctcaggccag
cagtgccggccctgcccctgtcctggctatcctggcacgcggcactaccacgggaccgcc
tgccacgctgatgaggagacccaccacattgtctgcctctgtgcacccggatatgcaggg
ccccgctgcgaccgctgctcccccggctacttcggtgctccggaggtggaggggggtgtg
tgccggccctgccagtgtaataacaacatcgacgccagtgatccagggggctgcgaccct
cgcacggggcagtgcctgcgctgcctgtaccacactgccgggccccactgtgcccagtgc
cagcccggctactacggcaatgccctgcagcgcagctgccggcgctgcggctgtgaccca
cggggcacactggcctcccactgtgccaatggcacctgtacctgtgaccgtggcacagga
gcctgtgcctgccggcccaacgttgtgggcaagatctgcgaccgctgtgcaccccagttc
tggagcctgggggatccagggggctgcgagccctgtgactgccaccccatacatgccctg
caccctgcctgtgacacggtgacagggcagtgccagtgccggcccgggttcgggggccgc
gtctgctcccagtgtcaggagcaccactggggagaccccgagcaggagtgtcgagcctgt
gagtgtgagccgctgggtgctgagagcccacagtgcgagcaggacagtgggcagtgccag
tgccggctgggatttggggggctgcactgcgaccgctgccagcggggctaccgggagccc
ttcccctactgctcgccctgccacccctgcttcgggcgctgggacccggctgtgggcagc
cttcgggacaggctgcggcgccttggggcacaggtgcaggccctgagggaggggggatcc
acgctcccactcagcccccgtcgcctgagggagctggaggagtccctcgggcgtgtggaa
cgactgctgggtgaaggggacaaccccagtagccccctcctcaatggactacccggccag
ctggacggtaccagaatggagctggacaacttctggaggcacctccaagagctggaacaa
catctagaccagttggcgcaggcagatgtgcggcaccatgaccggctagccgggctgagc
cacaagcttggaggtctcaaccgaaccacctcccatctccaaatcctgcttggcaccgta
gcaacgactggattcagcgagtcttaccgcagcatcctggcatcggcggaggtctctcgg
caggcagaggtggtggccaatggcacagccagtgagctgagcaggtcacaggcaacacgg
cgggcagccgagcgggcactgcggcagcggggcaatgctttccgccgtggcacagccgca
gcacggaaatccttgcgagaggcacagaaacgggtgatgggactcagcattgccaggatc
aatgagaagatttgtggggcgcctggagaccagagctgcaagcacgcaccttgtggagga
gccttgtgccgggacagtgagggcacacggcgttgcggtggcatggggtgtgcaggggca
ttgcccatctcagctcgagccctgagcagcgcccgtaatgcctcacagcagttggaggtg
gcattagggcagctgggtgttgtggcacagaagccgggtgccccccagatgcaggaggtg
caggagctggcccggggggcacggagctgggcagaggaggcactggggcgctcacaggct
gcccgcagccgcgcagagaaggcaacagcccagctgcgggacttcatccgccgaatcaag
gccttcctggcagaggagggagctgacccaggcagcatcgagctggtggctcggcaggtg
ctgaacatctccctgcctagcagtcccagtcggatccaggagctgctgtgggagatgcgg
gagagcatcagccagctagagggggtggatgcggtgctcaatggcacagcgaaggggctg
gccatggcacaggggctgctggcacagggacaggaggccagggagagagcggaaggtgtg
agggatgagctggtggagacacagcaggcactggaggtggcacgggcacaggcaacggca
gcagggagcgctctgcagagcgccaggaatgccatccgggcagctgaaaacaaagccagg
gaggcggagcgcaagctgcaggccctggacgggaaggagtcgcgggcacagcggcggctg
cgggagctggcgcagcgtgtcgctaccctgcaggagcgtggccgggatgttcgccacaag
gcccagcaagccaaggatggggcacagcgtgccacgaccacctcggggacactcagccag
gacctggcgcacgtgacgcagcgctatgtgttgctgaagaaccgagtgagagtgctggat
ggggtatctgatggggccctgcagcgtgtgacacagctgacagtagaggcccgaaacctc
ctggacaaggccagcaacagcaagaggaagctggaagacctggagcagcgctttggggcc
aacgagcgggcgatggcagcaaaggtgacacgactgcaggagttggagcaacaggtctcg
ggattgctgcaggagatccgcgagagggccaacgcttacgccacctgctag
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