Winslowiella toletana: RIN69_12405
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Entry
RIN69_12405 CDS
T09410
Symbol
pdeR
Name
(GenBank) cyclic di-GMP phosphodiesterase
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
eto
Winslowiella toletana
Pathway
eto02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
eto00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RIN69_12405 (pdeR)
Enzymes [BR:
eto01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
RIN69_12405 (pdeR)
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
PAS_10
Phage_CI_C
Motif
Other DBs
NCBI-ProteinID:
WNN42528
LinkDB
All DBs
Position
2664059..2666044
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AA seq
661 aa
AA seq
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MTDEQGQTLLYTLFGTTSPHWHLSADSDALNFAENEQADINLAVALVPAQASLIRSMTVI
TSSVNLSISLHGTLVALHLVGRKKDQFTWTGTASAWGDTSSVARDLTLGLSFAEQVVSEA
NSVIVILDKLGNIQRFNRLSEEYTGLKEQEVIGRNVFQLFMTKQEAAASRHNISGFFRDG
SSYEVERWIKTKKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLQLLANTD
SITGLPNRHAFNHQISQALEQRGESQLGVVYLDLDNFKKVNDAYGHMFGDQLLQAVALAI
LSCLEKNQTLSRLGGDEFVIQAEDSTQSALEAMSSRILERLKQPFRIGLIEVYTGCSIGI
AIAPLHGDDRESLIRNADTAMYTAKERGRGKFCLFHAEMNQRVFEYLWLDTNLRKALENQ
NLVIHYQPQVELNGEVTTVEALVRWQSTERGLIPPKDFISYAEESGLIVPLGRWVMLSVL
AQIIAWREQGITLRVAVNVSARQLLDQSIYSDLKQALQQAGIVGCPIDIELTESCLIDNE
KQALMLMKQFQDLGAEVHLDDFGTGYSSLSQLARIPVNAIKLDQSFVRGVDQQLVSQSLV
RAIVAVAKALKLRVIAEGIETKAEEQFIIASGVDSCQGYYYAKPMPAEQLGHWLAHHNVK
K
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatgaacaagggcaaacattgctgtatacgctgtttggtaccaccagccctcat
tggcatctttctgcagacagcgatgcacttaattttgccgaaaatgaacaggcggatatc
aatcttgccgtcgcgttggttccggcacaggccagcctgattcgcagcatgacggtgatc
acctccagcgttaatctgagcatatcgctgcatggcacgctggtcgcgctccatctggtg
ggacgcaaaaaagatcagtttacctggactggaaccgcatcggcatggggcgatacctcg
tcggtggcacgcgatctgaccctgggcctgtcgttcgccgagcaggtagtctctgaagcc
aactcggtaattgtgattctggataagctgggcaatattcagcgctttaaccggctaagt
gaggaatacaccggcctgaaagagcaggaagtgattggccgcaatgtgtttcagctgttt
atgaccaagcaggaagccgccgcttcgcgccacaatatcagcggtttttttcgtgacggc
agttcctatgaagtggagcgctggatcaaaaccaaaaaaggccagcggctgtttctgttt
cgcaataagtttgtccacagcggcagcggtaagaacgaaatatttctcatctgctccggc
actgatattaccgaggagcgacgcgcgcaagagcgcctgcaactgctcgccaatacagac
tctattactggcctgccgaatcgtcatgccttcaatcatcagataagccaggcgctggaa
cagcgcggtgaaagtcagcttggcgtggtctatctcgatctcgataactttaagaaggtt
aatgacgcctacggccatatgtttggcgatcagcttttacaggccgtcgcgctggcgatc
ctcagctgtcttgaaaaaaaccagacgctgtcgaggctgggaggcgatgagtttgttatt
caggccgaagatagcactcagtcagccctggaagcgatgtcgtcgcgcattcttgaacga
ctgaagcagccgttccgcatcggtctgattgaagtctataccggctgctcaattgggatt
gctattgctccactgcacggtgacgatcgtgaaagcctgattcgtaatgctgataccgca
atgtataccgcgaaagagcgtggtcgtggcaagttttgcctgtttcatgccgaaatgaac
cagcgggtatttgagtatttatggctggatactaacctgcgcaaagcgctggaaaaccag
aacctggtcattcattatcagccgcaggttgaactcaacggtgaagtcaccacggttgaa
gcgctggtacgctggcagtcaaccgaacgtgggctgattcctcccaaggactttatttcc
tacgctgaagagtccggattgatcgttccgctcggtcgctgggtgatgttatcggtgctg
gcacagattattgcctggcgcgaacaagggatcacgctgcgggtggcggtcaatgtttca
gcacgacagttgctcgatcagagcatctacagcgatctgaaacaggcgctgcagcaggcc
ggtatcgtgggctgcccgattgatatcgaactgaccgagagctgtttaattgataacgaa
aagcaggcgctgatgctaatgaaacagtttcaggatctgggcgctgaagtacatctggac
gattttggcaccggctattcttcactgtcacagctggcacgtataccggtgaatgctatt
aaactggatcaaagctttgtgcgcggcgtggaccaacagctggtgtctcaatcactggtg
cgcgcgattgtggcggtagccaaagcgctgaaattgcgggtgattgctgaaggcattgaa
accaaggccgaagaacagtttattatcgccagcggcgtcgattcctgtcagggctactat
tacgcaaaaccaatgcccgcagaacaactcgggcactggcttgcacatcataacgttaaa
aaatag
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