Erwinia tracheiphila: LU633_00750
Help
Entry
LU633_00750 CDS
T07827
Symbol
hmsP
Name
(GenBank) biofilm formation regulator HmsP
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
etp
Erwinia tracheiphila
Brite
KEGG Orthology (KO) [BR:
etp00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
LU633_00750 (hmsP)
Enzymes [BR:
etp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
LU633_00750 (hmsP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES3
GGDEF
HAMP
CHASE8
DUF668
P22_CoatProtein
Motif
Other DBs
NCBI-ProteinID:
UIA96642
LinkDB
All DBs
Position
145994..148027
Genome browser
AA seq
677 aa
AA seq
DB search
MRVSRSLTIKQMATVSGVATVTICIFIVIQLFHFVQQRRIDYAQQMENVAHTVRQPLSQA
VLKADTSQAGRILASLKPAGILAQADVVLPNGMQALHTDFELARPVPELIARLFELPIKI
TVPLYSLEPSNPKPLALLVLQADSWRVYQFILSALSTMVTIWLLMALVLSVSISWCINRL
IVRPLRTIATALQDLPPQEAIFHQLALPARHRDDELGMLIRSYNRNQQVSESVYSEMSRL
ITRVALTNLPNKALFLALLDEHLNSLVGDESFTVLILRIETLLEANGVVADEQRDVLLQT
LLERVKSAIDSHTIVGQLSGSDLVLLARRANSPFRAIRLARQLLLRLNQPVTLQQMQLRP
NVSIGLAQRDDSQLNAQDFISRAASAMMSARYQGKNQILFFDPAMMDRAHKRLTQEHNIL
QGLAEENFSLFLQPQVDMRNGQLVGSEALLRMRQPDGSWSLPEDLIVNAEEIGVIVSVGR
WVFEESCRVLAAWQKAGVTLTLSVNLSAAQLLEPDMVTHLRDLIERHRISPDSLMLEITE
TAQPSEPELALRLLGELQELGVAVALDDFGMGYANLNWLSQFKSLPISKLKIDRSFVCVL
PHDDTMVKIVAAIADIIRLDVIAEGVETPQQRDWLLARGIFIGQGYLYSEALPVQTFNEK
YFPGWQDAESERLPQEG
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgtaagtcgttcgttaacgataaaacagatggcgacggtttcaggcgtggcgacc
gtcaccatctgtatttttatcgtcattcaactttttcattttgtgcagcagcgcagaatt
gactacgcccagcagatggagaatgtggcgcatactgtgcggcaaccgctgtcgcaggcg
gtgctcaaggcggataccagccaggcggggcgcattcttgcatcactaaagccagcaggc
atccttgcccaggccgatgtggtattaccgaatggtatgcaggcgctgcataccgatttt
gaactggcgcggcccgtaccggaattgattgcccgcctgtttgagctgccgataaaaatt
actgtgccgctctattctctggagccttctaacccgaaaccgctggccctgttggttttg
caggcggattcctggcgggtttatcagtttatccttagcgcactgtcaacgatggtgacc
atctggctgttaatggcgctggttctgtccgtgtcgataagctggtgtattaaccgactc
atcgtccgtccgctgcggacgattgccaccgcattgcaggatctgccccctcaggaggcg
attttccatcagctggctttgcctgcgcgtcatcgcgatgatgaattaggcatgttgatc
cgcagctacaatcgtaatcagcaggtttcggagtcggtgtacagcgagatgagccgattg
atcacccgcgttgccctgaccaatttgccgaataaagcgctatttcttgcgctgcttgac
gagcatctcaattcacttgtcggcgatgaatcgttcaccgtgctgattttgcgtattgaa
acgctgctggaagcgaatggcgtggtggcggatgagcagcgtgatgtcctgttgcagacg
ctgctggaaagggttaaaagcgccatcgacagccacactattgtggggcaactttcaggt
agcgacctggtgttattagcacgacgggcaaatagccccttccgggcaatacggttggcg
cgccagcttttgctgcgtctgaatcaaccggtgacgttacagcaaatgcagttgcgtccg
aatgtctctatcggtctggcgcagcgcgatgacagccagctcaatgcgcaggattttatc
agccgtgcggcgtcggcaatgatgtctgcccgttatcagggcaaaaatcagattttgttt
tttgacccggcgatgatggatcgtgcgcacaagcgtctgacgcaggagcacaacattttg
caggggctggcagaggagaatttctcgctgttcttgcaaccgcaggtggatatgcgtaac
gggcagctggtcggttcggaagcgcttctacggatgcgtcagccggatggaagctggtcg
ctcccggaggatctgatcgtcaatgcagaagagattggcgtgattgtttcggtgggccgc
tgggtgtttgaggaatcctgtcgcgtgctggctgcatggcagaaagccggggtgacgctg
acactcagcgtgaatctctccgctgcacaattgctggagccggacatggtgacacatctt
cgcgatctgattgagcgccaccgtatttctccggacagcctgatgctggaaattaccgag
accgcacagcctagtgaacctgagctggcgttgcgtttattgggcgagttacaggagctt
ggggtggcggtggcgttggatgattttggcatgggctatgccaatcttaactggctcagt
cagtttaagtcgctgccaattagcaagctgaagatagaccgcagttttgtatgcgtatta
ccccacgacgacactatggtgaaaatcgtggcggccattgccgatatcatcagacttgat
gtcatcgctgaaggtgtggaaacaccgcagcagcgcgactggctgctggcgcgggggatc
tttattggccagggctatctttactcagaagcattgccggttcagacgtttaatgagaag
tattttcctggctggcaggatgcggagtcagaacggctccctcaggagggctga
DBGET
integrated database retrieval system
