Escherichia coli O17 K52 H18 UMN026 (ExPEC): ECUMN_1589
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Entry
ECUMN_1589 CDS
T00831
Symbol
gmr
Name
(GenBank) modulator of Rnase II stability
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
eum
Escherichia coli O17:K52:H18 UMN026 (ExPEC)
Pathway
eum02024
Quorum sensing
eum02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
eum00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ECUMN_1589 (gmr)
02026 Biofilm formation - Escherichia coli
ECUMN_1589 (gmr)
Enzymes [BR:
eum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
ECUMN_1589 (gmr)
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
GGDEF_2
PAS_10
Motif
Other DBs
NCBI-ProteinID:
CAR12795
UniProt:
B7N4A2
LinkDB
All DBs
Position
complement(1596587..1598572)
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AA seq
661 aa
AA seq
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MKTVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPERTLQLSAEQAARIREMTVI
TSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEA
HSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSG
NAYEVELWIPTRKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTD
SITGLPNRNAMQELIDHAINQADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAI
LSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGI
SLSPEHGSDSAAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALEND
QLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVV
RQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIEND
ELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLV
RAIVAVAQALNLQVIAEGVESKKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKR
A
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccgttagggagtccacaacgttgtacaactttctcggatcgcacaatccatac
tggcggttaacggaaagcagcgatgttttgcgcttttctaccaccgaaaccacagaacct
gaacgtacgttgcagttatctgccgaacaggctgctcgcatcagggaaatgacagtcatc
acttccagtctgatgatgagtctgaccgtcgatgaaagcgatctttctgtgcatctggta
ggacgaaaaatcaataaacgggaatgggctggcaacgcgtcggcatggcatgacacaccg
gcggttgctcgtgatttatcacacgggctttcctttgctgagcaggtagtttctgaagca
cattccgcaatagtgattctcgacagtcgggggaatatccagcgcttcaatcggttatgt
gaagattacacagggttgaaagaacacgacgtcattgggcaaagcgtgtttaaactgttt
atgagccgtcgtgaagctgcggcatccaggcgcaataaccgtgtattttttcgaagcggc
aatgcatatgaagtcgaactgtggataccaacacgtaaaggccagcggctgtttctgttt
cgcaataaatttgtccacagcggtagtggcaaaaacgagatttttttaatctgttccggc
accgacattaccgaagagcgccgcgctcaggagcgactgcgcattctggcaaataccgac
agtatcaccggactgccgaatcgtaacgcaatgcaggagttaatcgatcacgctattaat
caggcagataacaataaagttggggttgtgtatcttgatttggataattttaaaaaggtc
aacgacgcctatgggcatttgtttggtgaccagctattacgcgacgtgtcattggccatt
ttaagctgtctcgaacatgaccaggtgttggcgcgtccaggtggcgatgagtttctggta
ctggcatccaatacctcacaaagcgcgctggaagcaatggcatcacgaattttgacccgc
ttacgactccccttccgcattggtttaattgaagtttataccagctgttcagtgggtatt
tcactctctcccgaacatggttcggacagcgcggctattattcgtcacgccgacacagca
atgtacacagcgaaggaaggcggacgaggacaattttgcgtttttaccccagaaatgaat
cagcgggtatttgaatatctctggctggataccaacttgcgtaaagcactggaaaacgat
cagttggttattcactatcaaccgaaaatcacctggcgtggcgaagtgcgcagtctggaa
gcactagtacgttggcagtcacctgaacgtgggttgattccaccgttggacttcatttcc
tacgccgaagagtcagggctaattgtgcctttaggccgttgggtgattctcgatgtcgta
cgccaggtggcaaagtggcgggataaaggtattaacctgcgagtggcggtaaacatttct
gcacgtcagctcgccgatcaaaccattttcaccgccctgaaacaggttctccaggaactc
aattttgaatactgccctattgatgttgaactgacggagagctgcctgattgagaatgat
gaactggcactttctgttattcaacaatttagccaactaggtgcgcaagtgcatctggac
gattttggtaccggctactcttcactttcgcaactggcgcgctttccgatcgatgcgatt
aaacttgaccaggtttttgttcgggatattcacaaacagcctgtatcgcagtcgctggtc
cgggcgatcgtcgctgtggcccaggcattgaatcttcaggtgatcgctgaaggagtggag
agtaaaaaggaagatgcttttttaaccaagaacgggatcaatgagcggcaaggatttttg
tttgccaaaccgatgcccgccgtcgcctttgaacgctggtataaacgctatctgaagcgc
gcataa
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