Escherichia coli UMNK88 (ETEC, porcine): pUMNK88_40
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Entry
pUMNK88_40 CDS
T02001
Symbol
tetA
Name
(GenBank) tetracycline repressor protein TetA, class A
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
eun
Escherichia coli UMNK88 (ETEC, porcine)
Brite
KEGG Orthology (KO) [BR:
eun00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
eun02000
]
pUMNK88_40 (tetA)
01504 Antimicrobial resistance genes [BR:
eun01504
]
pUMNK88_40 (tetA)
Transporters [BR:
eun02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
pUMNK88_40 (tetA)
Antimicrobial resistance genes [BR:
eun01504
]
Gene variants
Tetracycline resistance genes
Transporters
pUMNK88_40 (tetA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
MFS_3
MFS_1_like
Nuc_H_symport
LacY_symp
TRI12
PROL5-SMR
Motif
Other DBs
NCBI-ProteinID:
ADM62581
LinkDB
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Position
pUMNK88:complement(27343..28617)
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AA seq
424 aa
AA seq
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MSTNLSVIKNPRVQSDQRRLVRRPDVKPNRPLIVILSTVALDAVGIGLIMPVLPGLLRDL
VHSNDVTAHYGILLALYALMQFACAPVLGALSDRFGRRPVLLVSLAGAAVDYAIMATAPF
LWVLYIGRIVAGITGATGAVAGAYIADITDGDERARHFGFMSACFGFGMVAGPVLGGLMG
GFSPHAPFFAAAALNGLNFLTGCFLLPESHKGERRPLRREALNPLASFRWARGMTVVAAL
MAVFFIMQLVGQVPAALWVIFGEDRFHWDATTIGISLAAFGILHSLAQAMITGPVAARLG
ERRALMLGMIADGTGYILLAFATRGWMAFPIMVLLASGGIGMPALQAMLSRQVDEERQGQ
LQGSLAALTSLTSIVGPLLFTAIYAASITTWNGWAWIAGAALYLLCLPALRRGLWRNSSN
SRCT
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaacttatcagtgataaagaatccgcgcgttcaatcggaccagcggaggctg
gtccggaggccagacgtgaaacccaacagacccctgatcgtaattctgagcactgtcgcg
ctcgacgctgtcggcatcggcctgattatgccggtgctgccgggcctcctgcgcgatctg
gttcactcgaacgacgtcaccgcccactatggcattctgctggcgctgtatgcgttgatg
caatttgcctgcgcacctgtgctgggcgcgctgtcggatcgtttcgggcggcggccggtc
ttgctcgtctcgctggccggcgctgctgtcgactacgccatcatggcgacggcgcctttc
ctttgggttctctatatcgggcggatcgtggccggcatcaccggggcgactggggcggta
gccggcgcttatattgccgatatcactgatggcgatgagcgcgcgcggcacttcggcttc
atgagcgcctgtttcgggttcgggatggtcgcgggacctgtgctcggtgggctgatgggc
ggtttctccccccacgctccgttcttcgccgcggcagccttgaacggcctcaatttcctg
acgggctgtttccttttgccggagtcgcacaaaggcgaacgccggccgttacgccgggag
gctctcaacccgctcgcttcgttccggtgggcccggggcatgaccgtcgtcgccgccctg
atggcggtcttcttcatcatgcaacttgtcggacaggtgccggccgcgctttgggtcatt
ttcggcgaggatcgctttcactgggacgcgaccacgatcggcatttcgcttgccgcattt
ggcattctgcattcactcgcccaggcaatgatcaccggccctgtagccgcccggctcggc
gaaaggcgggcactcatgctcggaatgattgccgacggcacaggctacatcctgcttgcc
ttcgcgacacggggatggatggcgttcccgatcatggtcctgcttgcttcgggtggcatc
ggaatgccggcgctgcaagcaatgttgtccaggcaggtggatgaggaacgtcaggggcag
ctgcaaggctcactggcggcgctcaccagcctgacctcgatcgtcggacccctcctcttc
acggcgatctatgcggcttctataacaacgtggaacgggtgggcatggattgcaggcgct
gccctctacttgctctgcctgccggcgctgcgtcgcgggctttggagaaattcttcaaat
tcccgttgcacatag
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