KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10001026mg
Entry
EUTSA_v10001026mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
eus  Eutrema salsugineum (saltwater cress)
Pathway
eus03020  RNA polymerase
eus03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:eus00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    EUTSA_v10001026mg
  09124 Replication and repair
   03420 Nucleotide excision repair
    EUTSA_v10001026mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:eus03021]
    EUTSA_v10001026mg
   03400 DNA repair and recombination proteins [BR:eus03400]
    EUTSA_v10001026mg
Transcription machinery [BR:eus03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     EUTSA_v10001026mg
DNA repair and recombination proteins [BR:eus03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      EUTSA_v10001026mg
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 18016068
NCBI-ProteinID: XP_006398486
UniProt: V4L8D7
LinkDB
Position
Unknown
AA seq 208 aa
MSEKGGKGIKSSLKSPSKYGSGKDDNSTKSKKTRKVQFDPLGTSDSKYKIVQDSDYQFQG
SSAKGGKGTNAKKITRSKESQPLELKTEKELPENAKCLMDCEAFQILEGIKEQLAVLSDD
PSIKIPVSFNRGLEYLKLGSCYTNPQSARQILEPLKKHGVSEGELCMIANVCPESIDEVF
AFVPSMKGKKDKISQPLEEALTKLSKLK
NT seq 627 nt   +upstreamnt  +downstreamnt
atgtcggagaaaggaggaaaagggataaaatcttctctcaaatctccttccaaatatgga
tccggcaaggatgataactcaaccaaatctaagaagacgaggaaagtccagtttgatcct
ctaggcacatcggattctaagtataagattgtgcaagactctgattaccaatttcaagga
tcttctgctaaaggtgggaaaggaaccaacgctaagaaaattactcggtccaaagaatct
cagccgcttgagctcaagactgaaaaggagcttccagagaatgccaagtgtttgatggac
tgtgaggcttttcagattctagaaggcatcaaggaacaactagctgtgttatctgacgat
cctagcataaagattcctgtatctttcaacagaggactggagtacctgaaacttggtagt
tgctacacgaaccctcaatctgccagacagatccttgaacctctaaaaaagcatggtgtc
tctgaaggcgagctgtgtatgattgcaaatgtctgcccagaaagtattgatgaagttttt
gcctttgttccatccatgaaggggaagaaagacaagatcagtcagcctttagaagaggca
ttgacgaagctatccaaactcaaatga

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