KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10011060mg
Entry
EUTSA_v10011060mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
eus  Eutrema salsugineum (saltwater cress)
Pathway
eus03020  RNA polymerase
eus03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:eus00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    EUTSA_v10011060mg
  09124 Replication and repair
   03420 Nucleotide excision repair
    EUTSA_v10011060mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:eus03021]
    EUTSA_v10011060mg
   03400 DNA repair and recombination proteins [BR:eus03400]
    EUTSA_v10011060mg
Transcription machinery [BR:eus03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     EUTSA_v10011060mg
  RNA polymerase III system
   RNA polymerase III
     EUTSA_v10011060mg
  RNA polymerase I system
   RNA polymerase I
     EUTSA_v10011060mg
DNA repair and recombination proteins [BR:eus03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      EUTSA_v10011060mg
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N Arg_repressor Glyco_tran_WbsX
Other DBs
NCBI-GeneID: 18021218
NCBI-ProteinID: XP_006403570
UniProt: V4LYQ0
LinkDB
Position
Unknown
AA seq 236 aa
MEENMDVEWSCENGGASTFNDGTNCHCIAKTEDNGSIESKRLYLARTTAFEMLRDRGYQV
SDAELSRSLSEFRSAFGEKPDLERLRICVSLRSDPNKKILVVFMGSEPITVKSVRPIHSQ
ISSSEGLHGLILILQSKMNHFAQKELTTFPFTVETFPIGDLLVNITKHTQQPKIEVLTKE
EKEQFLKKHALKDKQIPYLQETDSFVRYYGLKKRQVVKITYSKEPVGSFVTYRCII
NT seq 711 nt   +upstreamnt  +downstreamnt
atggaggagaatatggacgtagaatggagctgtgaaaatggaggtgcgtccacttttaac
gatgggaccaactgtcactgcattgcgaagactgaggacaacggtagtatcgaaagcaag
aggctttacttggctcgcacgacagcctttgagatgcttcgcgacagaggctaccaagtt
tccgacgccgagctctctcgctctctctctgagtttcgttctgcttttggtgagaagcca
gaccttgaacgcctccgtatctgtgtgtctctccgctcagatcccaataaaaagattctt
gtcgtgttcatggggtctgaaccaatcactgtgaaatcagtccgtcctattcatagtcag
atttccagcagtgaaggcttgcatggtctgattctgattttacagagcaaaatgaaccac
tttgcccagaaggaattgacaaccttcccttttactgttgaaactttcccgattggagat
ttgttggtcaacatcacaaagcacactcagcagccaaagattgaggtcttaacaaaagaa
gagaaagaacaatttctgaagaaacatgcgcttaaggacaaacagattccttatttgcaa
gagacggacagcttcgtgagatactatgggttaaagaagagacaggtagtgaagatcaca
tacagtaaagagcctgttgggtctttcgtcacataccgatgcatcatctga

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