Eutrema salsugineum (saltwater cress): EUTSA_v10018211mg
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Entry
EUTSA_v10018211mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus00052
Galactose metabolism
eus00511
Other glycan degradation
eus00531
Glycosaminoglycan degradation
eus00600
Sphingolipid metabolism
eus00604
Glycosphingolipid biosynthesis - ganglio series
eus01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
EUTSA_v10018211mg
09103 Lipid metabolism
00600 Sphingolipid metabolism
EUTSA_v10018211mg
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
EUTSA_v10018211mg
00604 Glycosphingolipid biosynthesis - ganglio series
EUTSA_v10018211mg
00511 Other glycan degradation
EUTSA_v10018211mg
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
eus04147
]
EUTSA_v10018211mg
Enzymes [BR:
eus01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
EUTSA_v10018211mg
Exosome [BR:
eus04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
EUTSA_v10018211mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
Glyco_hydro_42
BetaGal_ABD2
Motif
Other DBs
NCBI-GeneID:
18009341
NCBI-ProteinID:
XP_006390605
UniProt:
V4M9P4
LinkDB
All DBs
Position
Unknown
AA seq
696 aa
AA seq
DB search
MLDQVYVCRRRPSTGRHHLARVLFLVLVAVGISVPVFGFLPSLSSPQFLPTAFPRDDKMI
SRIFYIRDDMFWKDENPFQIIGGDLHYFRVLPEYWEDRLLRAKALGLNTIQMYVPWNLHE
PKPGEMVFEGISDVVSFIKLCQKLDFLVMLRAGPYICGEWDFGGFPAWLLAVQPPLKLRT
SDPAYLKLVERWWDVLFPKVLPLLYSNGGPVIMVQIENEYGSYGNDKAYLRNLVSMARGY
LGDDIIVYTTDGGTRETLEKGTVPLDDVYSAVDFTTGDDPWPIFELQKKFNAPGRSAPLS
SEFYTGWLTHWGEKIAKTDAEFTAASLEKILSRNGSAVLYMVHGGTNFGFYSGANTGSEE
SDYKPDLTSYDYDAPIKESGDIDNPKFQALQRVIMKYNPEPHSIIPSNKKRKAYGSIKMQ
MTASLFDLVSMTDVADVITSANPISMESSGQMFGFLLYESSYVAKKSGNILRIPKVHDRA
QVFVSCLSQDVDVGVLRYIGTTERWNNHPVTIPTIGCTSNTSLSILVENMGRVNYGPYIF
DEKGILSSVYLDGQILHGWKMIPIPFHNLNQMPNLSFEIQNTKKRSQKFNDVSQKEPALF
AGEFSINSVEEIKDTYLSFNGWGKGVAFVNKFNIGRYWPSVGPQCNLYVPAPLLKPGQNS
VVIFELESPYLDLLLEAVDREDFTCRSNDSKVNHVR
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgttagaccaagtctacgtttgcagaagaaggccatcaacgggaagacatcatcttgct
cgcgtgttgttcctggttcttgtagctgtcggaatctctgttcctgtcttcggttttctt
ccttcactgtcatctcctcagtttcttcctactgcctttcctcgggacgataagatgata
tctcggattttttatataagagatgacatgttctggaaagatgagaatccttttcaaatc
attggtggtgatttgcactacttccgggttcttcctgagtactgggaagataggctcctg
agagccaaggctttaggtctgaatactatacaaatgtatgttccttggaatctgcacgaa
ccaaagcctggggagatggtctttgagggtatttctgacgttgtgtcctttatcaagctg
tgtcagaaactagatttcctggttatgctgcgtgctggaccttatatctgtggagaatgg
gattttgggggttttcctgcatggttactcgctgtgcaaccacctctcaaattaaggaca
tcagatcctgcatatcttaagttggttgaaagatggtgggatgttttgtttccaaaggta
ttacccctgctttacagcaacgggggtcctgttataatggttcagattgaaaatgaatat
ggctcatacggaaatgacaaagcttatcttcgtaatctagttagtatggcaaggggatac
ctgggggatgacattattgtgtacacaacagatggaggtacaagagaaactcttgagaaa
ggaactgtgcccttagatgatgtttactcagctgttgatttcactaccggtgatgaccct
tggccaatattcgaattgcaaaagaagtttaatgctccaggaagatcagctccactttcc
tcggagttctatactggttggctcacgcattggggtgagaagattgcaaagacagatgcc
gaatttacggcagcttctcttgaaaaaatactgtctcgaaatggttctgctgtgctttat
atggtgcacggaggaacaaattttggtttctacagtggagcaaatactggctctgaagaa
tctgactacaaaccagatctgacatcctacgattatgatgctcccattaaagagtctggt
gacatagataatccaaaattccaagctctccagagagtgattatgaagtacaatcctgaa
ccacactccattatcccctccaataaaaaacggaaagcatatggctcgatcaagatgcag
atgacagcatctctgtttgatttagttagtatgacagatgttgcagatgtgatcacctct
gccaacccaatttcaatggaatcttctggacagatgttcggatttcttttatatgaatct
tcatacgtcgcaaaaaagagtgggaatatactaagaatacccaaggtacatgacagagct
caagtgtttgtttcatgcctttcccaagatgttgatgtgggagtactgagatacattggc
acaactgagagatggaacaaccaccctgtcactattccaactattggatgtacctctaac
actagcttatctattctggttgaaaacatgggtcgtgtaaattacgggccatatatcttt
gatgagaagggtattctgtcttccgtttatctagatggtcaaatcctccatggatggaag
atgataccaattccttttcacaacttgaatcaaatgccaaatctcagtttcgagatacaa
aataccaaaaagagaagtcagaagtttaatgatgttagtcaaaaggaaccagctctgttt
gctggcgagttctctattaacagtgtagaagaaatcaaagatacatatctatcattcaat
ggttggggtaaaggagttgcttttgtcaataaattcaacatcggaagatattggccgtct
gttggaccacaatgcaacctctacgtccctgcgcctctccttaagcctggccaaaattct
gtggtgattttcgagctggagtcgccatatctcgaccttttgctggaagcagtggatcgg
gaagacttcacatgccgttcaaatgattctaaagttaatcatgtaaggtga
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