Eutrema salsugineum (saltwater cress): EUTSA_v10020573mg
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Entry
EUTSA_v10020573mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus00906
Carotenoid biosynthesis
eus01100
Metabolic pathways
eus01110
Biosynthesis of secondary metabolites
Module
eus_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
EUTSA_v10020573mg
Enzymes [BR:
eus01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
EUTSA_v10020573mg
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Ortholog
Paralog
GFIT
Motif
Pfam:
Lycopene_cycl
DAO
Pyr_redox_2
NAD_binding_9
FAD_oxidored
Thi4
Pyr_redox_3
Pyr_redox
HI0933_like
NAD_binding_8
GIDA
FAD_binding_3
Trp_halogenase
FAD_binding_2
Motif
Other DBs
NCBI-GeneID:
18023796
NCBI-ProteinID:
XP_006407592
UniProt:
V4LF12
LinkDB
All DBs
Position
Unknown
AA seq
500 aa
AA seq
DB search
MDTLLKTPNKLEFFIPQFHGFERLATNNPNPSRVKLGVKKRAIKIGSSSSSSALLDLVPE
TKKENLDFELPLYDASVNKVVDLAIVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNN
YGVWVDEFEAMDLLDCLDTTWSGAVVYIDEGVKKDLSRPYGRVNRKQLKSKMLQKCITNG
VKFHQSKVTNVIHEEANSTVVCSDGVKIQASVVLDATGFSRCLVQYDKPYNPGYQVAYGI
VAEVDGHPFDVDKMVFMDWRDSHLDSYPELKERNSKIPTFLYAMPFSSNRIFLEETSLVA
RPGLRMEDIQERMVARLKHLGINVKRIEEDERCVIPMGGPLPVLPQRVVGIGGTAGMVHP
STGYMVARTLAAAPIVANAIVRYLGGSSSKNSLRGDQLSAEVWRDLWPIERRRQREFFCF
GMDILLKLDLEATRRFFDAFFDLQPHYWHGFLSSRLFLPDLLFFGLSLFSHASNTSRLEI
MTKGTVPLAKMINNLVQDRD
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggacactctgttgaaaacgcccaacaagctcgagtttttcatccctcagtttcatggg
tttgagagactcgccactaataatccaaatccttcaagggttaagcttggtgtgaagaaa
agggcaatcaaaattggtagtagtagtagtagcagtgctcttttggatcttgttcctgaa
actaagaaggagaatcttgactttgagcttcccttgtatgatgcttctgtgaataaagtt
gttgatttggctattgtcggtggtggccctgctggtttagccgtggctcagcaggtttcc
gaggctggactctctgtttgttccattgatccttctccgaagctcatatggcctaacaac
tatggagtttgggttgacgagtttgaggctatggacttgctcgattgccttgacaccact
tggtccggtgctgttgtctatatcgatgaaggtgtcaagaaggatttaagccggccttat
gggagagttaaccggaaacagctcaaatccaaaatgcttcagaaatgtataaccaacggt
gttaagtttcatcagtcgaaagtcactaacgtgattcacgaggaggcaaactccactgtg
gtttgcagtgacggtgtaaagattcaggcttcagtggttcttgatgcaaccgggttttcc
cgatgcttggttcagtatgacaaaccgtataaccccgggtatcaagtagcttatgggatc
gtggctgaagttgatggtcacccattcgatgtagacaaaatggtgttcatggattggaga
gatagtcatctggactcatatccagagcttaaagaacggaacagcaagatcccgacgttc
ttgtatgcgatgccgttttcttccaaccgaatatttcttgaagaaacgtctcttgttgct
agacccggtttgcggatggaagatatccaagaaagaatggttgctaggctgaaacatctg
gggatcaatgtgaagcggattgaggaagatgagcgttgtgtgatccctatgggtggtcct
ttaccggttttacctcagcgtgttgttgggattggtggtacagcgggaatggttcatcct
tcaaccggttacatggtggctaggactcttgcagccgcaccaatagttgcaaacgccatt
gtgagatatctcggtggttcatcgagtaagaacagtctgagaggagatcaactctctgct
gaggtatggagagacttatggcctattgaacggcgtagacagagggagttcttctgtttt
ggaatggatattctgctgaagctcgatttagaagctactagaaggttctttgatgcattc
tttgatctgcaaccgcattactggcatggattcttgtcttccaggctgtttctcccggac
ctattgttcttcggcttgtcgctcttctcacatgcttccaatacctcaagattggagatc
atgacaaagggaactgttcctcttgccaagatgatcaacaatttggtacaagatagagac
taa
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