KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10028022mg
Entry
EUTSA_v10028022mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
eus  Eutrema salsugineum (saltwater cress)
Pathway
eus03020  RNA polymerase
eus03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:eus00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    EUTSA_v10028022mg
  09124 Replication and repair
   03420 Nucleotide excision repair
    EUTSA_v10028022mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:eus03021]
    EUTSA_v10028022mg
   03400 DNA repair and recombination proteins [BR:eus03400]
    EUTSA_v10028022mg
Transcription machinery [BR:eus03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     EUTSA_v10028022mg
  RNA polymerase III system
   RNA polymerase III
     EUTSA_v10028022mg
  RNA polymerase I system
   RNA polymerase I
     EUTSA_v10028022mg
DNA repair and recombination proteins [BR:eus03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      EUTSA_v10028022mg
SSDB
Motif
Pfam: DNA_RNApol_7kD YjdM_Zn_Ribbon DUF5816 HypA DUF1451 zinc_ribbon_13 zf-ribbon_3 OrfB_Zn_ribbon A2L_zn_ribbon Zn-ribbon_8
Other DBs
NCBI-GeneID: 18022979
NCBI-ProteinID: XP_006405406
UniProt: V4LSQ6
LinkDB
Position
Unknown
AA seq 51 aa
MDPLPEPVTYVCGDCGQENTLKSGDVIQCRECGYRILYKKRTRRVVQYEAR
NT seq 156 nt   +upstreamnt  +downstreamnt
atggatccacttcccgaacccgttacctacgtctgcggagattgtggacaagagaacaca
ttgaagtctggagatgtgatccaatgcagagagtgtgggtatcgtattctgtacaagaag
cgtacccgtagagttgttcaatacgaagctcgctga

DBGET integrated database retrieval system