Ficedula albicollis (collared flycatcher): 101806869
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Entry
101806869 CDS
T02815
Symbol
CDKAL1
Name
(RefSeq) CDK5 regulatory subunit associated protein 1 like 1
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fab03016
]
101806869 (CDKAL1)
Enzymes [BR:
fab01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
101806869 (CDKAL1)
Transfer RNA biogenesis [BR:
fab03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
101806869 (CDKAL1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
Motif
Other DBs
NCBI-GeneID:
101806869
NCBI-ProteinID:
XP_005041655
UniProt:
U3KGF0
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Position
2:complement(62427103..62824513)
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AA seq
582 aa
AA seq
DB search
MPAACESVLEDIEDIVSAEDLKPHDRHFVRKNVFPKVRKRSSQKNVQADEEPPSDSIIPG
VQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITDDSAEADLWLLNSCTVKNPAEDHFRNS
IKKAQEGKKKVVLAGCVPQAQPRQEYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQK
KDNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPIEELVDRA
KQSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVEVIPEGAMLRLGMTNPPYILEHL
EEMAKILNHPRVYAFLHIPVQSASDSVLMDMKREYCVADFKQVVDFLKEKVPGITIATDI
ICGFPGETDEDFQETMKLVELYRFPSLFINQFYPRPGTPAAKMPQVPAAVKKQRTKDLSQ
LFHSYNPYDHKVGERQRVLVTEESFDSNYYVAHNPFYEQVLVPKDPLLMGKMVEVNIYEA
GKHFMKGQPVSDARVHTASISRPLAKGEVSGLTEEFRRSAQNGTNWKAQPSAEIPGKTQP
SSCMALQLPWQQGGGGLKILSVSLALLAVLVMFYYRGMKTEL
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgcctgtgagtcagtgcttgaggatatagaagacatcgtgtcagcagaagat
ctgaagccacacgatcggcactttgtgagaaagaatgttttccccaaagtgcgaaaacgc
agctcccagaaaaacgttcaggcagatgaggagcccccaagtgacagtattattcctggt
gttcagaaaatctggattcgtacatggggatgttctcacaataattcggatggtgaatac
atggctggacagctggctgcatatggatacaaaattacagatgattctgctgaagcagat
ttatggttgctgaacagttgtacagtaaaaaatcctgctgaagaccacttcagaaactca
atcaagaaagcccaagaagggaagaagaaagttgttctggcaggctgtgtaccccaagcc
caacctcgccaggagtacctgaaaggcttgagtattataggggttcagcagatagatcgt
gtagtagaagttgtggaggaaactattaaaggtcattctgtgagactgctgggtcagaaa
aaggataatggaaaacgtttggggggagcacgattggatttgccaaagattaggaagaat
ccactgatagaaataatttccatcaatacagggtgtctcaatgcatgtacctactgtaaa
actaagcatgccagaggagatctagcaagttatcctattgaagaacttgtggacagagcc
aagcagtcttttcaagagggtgtttgtgagatatggctgaccagcgaagacacaggggct
tatggcagagacattggcacagacctccccacgcttctctggaagctggttgaagttatt
cctgagggagctatgctgaggcttggcatgacaaaccctccctatattttagagcatctg
gaggaaatggccaagattctcaatcatcctagagtatatgcttttctgcacataccagtc
cagtcagcctctgacagtgtgctcatggacatgaaaagagaatattgtgtggcagacttc
aaacaagtagtggatttccttaaagaaaaggtgcctggaataacaattgctacagacatc
atttgtggttttccaggagagacagatgaagattttcaagaaactatgaaacttgtagaa
ctgtacaggtttccaagcttgtttatcaatcaattctacccacgaccaggaaccccagct
gcaaaaatgcctcaggttccagctgcagtgaaaaagcagagaacaaaggatctgtcccag
ctgtttcattcatacaatccatatgatcataaggttggtgagaggcagagagttctggtt
acagaagaatcctttgactccaattactacgttgctcacaatcctttctatgagcaggtt
cttgtgccaaaggatcccctgttaatgggtaagatggtagaagtgaatatttatgaagct
gggaaacattttatgaaggggcagccggtatcagatgccagagttcacactgcatccatc
agcagaccgttagcaaaaggagaagtttctggtttaacagaggagttcagacgttcagcc
cagaacggcacaaactggaaagcacagccttctgctgagatcccagggaaaacacagccc
agctcctgcatggctttgcagctcccatggcaacaagggggaggtggactgaagatcctg
tctgtcagcctggctctactggcagtccttgttatgttttactacagaggaatgaaaaca
gaactgtga
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