Ficedula albicollis (collared flycatcher): 101808230
Help
Entry
101808230 CDS
T02815
Symbol
NOTCH1
Name
(RefSeq) notch 1
KO
K02599
Notch 1
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
101808230 (NOTCH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
Ank_2
EGF_2
Ank
NOD
Notch
NODP
Ank_4
Ank_5
Ank_3
EGF_3
cEGF
Motif
Other DBs
NCBI-GeneID:
101808230
NCBI-ProteinID:
XP_016157893
LinkDB
All DBs
Position
17:9437161..9481869
Genome browser
AA seq
2556 aa
AA seq
DB search
MTGDSFRYRAHAVANAVPLFAGLRCSQLAESCLNGGKCETFPNGTEVCQCGGAYVGERCQ
LPNPCLSSPCKNAGTCTALVRGGSAGYSCACRLGFTDELCLTPRDNVCLSNPCRNGGTCE
LLTLSEYKCRCPPGWSGKTCQQADPCASNPCANGGQCVPFEAHYVCRCTAGFHGANCKQD
VNECNISPPVCKNGGSCTNEVGTYQCSCRPAYTGQNCEHLYVPCNPSPCQNGGTCRQIGD
TTYDCTCLPGFTGQNCEENINDCPGNNCKNGGTCVDGVNTYNCQCPPEWTGQYCTEDVDE
CQLMPNACQNGGTCHNNHGGYNCVCVNGWTGEDCSENIDDCAMAACFHGATCHDRVASFY
CECPHGRTGLLCHLDDACISNPCNEGSNCDTNPVNGKAICTCPSGYMGPACNQDVDECSL
GANPCEHAGKCINTQGSFQCQCLQGYSGPRCEIDVNECLSNPCQNDATCLDQIGEFQCIC
MPGYEGVYCEINTDECASSPCLHNGNCLDKINEFHCECPTGFNGHLCQFDIDECASTPCK
NGAKCVDGPNTYSCECTEGFTGAHCEVDIDECDPDPCHYGTCKDSIASFTCLCQPGYTGH
RCDININECQSQPCKNGGTCQDRNNAYNCICLKGTTGPNCEINLDDCASNPCDYGKCIDK
INGYECTCEPGYTGRMCNINIDECASSPCHNGGTCKDGINGFTCLCPEGFHDPKCLSEVN
ECNSNPCIHGKCHDGLNGYKCDCDPGWSGTNCDINNNECESNPCMNGGTCKDMTSGYICT
CREGFSGPNCQTNINECASNPCLNQGTCIDDVAGYTCNCLLPYTGATCEDVLAPCAGSPC
KNGGECQESEDYKSFSCSCPPGWQGQTCEIDINECVKSPCRNGATCQNTNGSYRCACRTG
FSGRNCDTDIDDCKPNPCHNGGSCSDGIGTFFCECLAGFRGPKCEEDINECASNPCKNGA
NCTDCVNSYTCTCPSGFSGIHCENNTPDCTESSCFNGGTCVDGINTFTCVCLPGFTGSYC
EHNINECDSKPCLNGGTCQDSYGTYKCTCPQGYTGLNCQNLVRWCDSSPCKNGGKCWQTS
NLYHCECNSGWTGLYCDVPSVSCEVAAKQQGIDVAHLCRNSGLCVDTGNTHFCRCQAGYT
GSYCEEQVDECSPNPCQNGATCTDYLGGYSCECVAGYHGVNCSEEINECLSHPCQNGGTC
IDLINTYKCSCPRGTQGVHCEINVDDCSPFFDPVTLGPKCFNNGKCKDRVGGYSCICPPG
FVGERCEGDVNECLSNPCDARGTQNCVQRVNDYKCECRPGYAGRRCDTVVDGCKGKPCRN
GGTCAVASNTGRGFICKCPPGFVGATCENDSRTCGNLHCLNGGTCISIHKSSKCMCTPAF
TGPECQYPASSPCTSNPCYNGGTCEFFSDASPFYRCNCPANFNGLNCHILDFDFQGGVGQ
DIIPPKIEEKCEIAVCAGFAGNKICDGKCNNHACGWDGGDCSLNFNDPWKNCSQSLQCWK
YFNDGKCDSQCNNAGCLYDGFDCQKYEGQCNPLYDQYCKDHFSDGHCDQGCNNFECEWDG
LDCANNMPEKLADGTLVVVVLITPENLKNNSFNFLRELSRVLHTNVVFKKNAKGEYMIFP
YYGNEEELKKHYIKRSTEDWSDMPSAVINKVKSSLYSRAGRRQKRELDQMDIRGSIVYLE
IDNRQCIQSSSQCFQSATDVAAFLGALASLGNLNIPYKIEAVKSETAEPTKNSQLYPMYV
VGAALVLLAFIGLGVLVSRKRRREHGQLWFPEGFKVTESSKKKRREPLGEDSVGLKPLKK
ASDGTLMDDNQNEWGDEETLDTKKFRFEEQAMLPDTDDQTDHRQWTQQHLDAADLRISSM
APTPPQGEIDADCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEDDAPAVISDFIYQGA
SLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQ
ILIRNRATDLDARMHDGTTPLILAARLAVEGMLDDLINCHADVNAVDDLGKSALHWAAAV
NNVEAAMVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPR
DIAQERMHHDIVRLLDEYNLVRSPTLHNGPLGAPTLSPPLCSPSSYIGNLKPAVQGKKAR
KPSTKGLSCNGKDAKDLKARRKKSQDGKGCLLDGSGVLSPVDSLESPHGYLSDVASPPLM
TSPFQQSPSMPLNHLPGMPDAHLSINHLNMAGKQDMAMGGSGRMGFDSVPPRLSHLPVSS
PSTAMSSAPMSFSVGSGAGLNGQCDWLSRLQNGMVQGQYNPLRGNLQPGAHQQPQNLQHG
MMGSLHNGLPSTSLSQMMSYQAMPNTRLASQPHLMQSQQLQQMQQQQQQQQQQQQNLQQP
NLQPPPQQQPPPQPPQQHQQQHHNPGSNGMGQNFLGTELSQPELQPVSGGAMAVHTILPQ
DSQLLPTSLPSSLAQPMTSTQFLTPPSQHSYSSPLDNTPSHQLQVPDHPFLTPSPESPDQ
WSSSSPHSNVSDWSEGISSPPTSMQSQMGHIPEAFK
NT seq
7671 nt
NT seq
+upstream
nt +downstream
nt
atgacgggcgactcatttcgttaccgagctcatgctgtggctaatgctgtccctctgttt
gcaggtttacggtgctcgcagcttgccgaatcctgcctcaacgggggcaagtgtgaaact
tttcccaacgggacggaggtgtgccagtgtggcggcgcctacgtgggcgagcggtgccag
ctgcccaacccctgcctgagctccccgtgcaagaacgccggcacgtgcacggcgctggtg
cgcggcggcagcgcgggttacagctgcgcctgccgcctgggcttcaccgacgagctgtgc
ctgacgccccgcgacaacgtctgcctcagcaacccctgccgcaacggcggcacctgcgag
ctgctgaccctcagcgagtacaagtgccgctgcccgcccggctggtcaggcaaaacctgc
cagcaggccgacccctgtgcctccaacccgtgtgccaacgggggccagtgcgtgcccttc
gaagcgcactacgtgtgccgctgcaccgccggcttccacggcgccaactgcaagcaggac
gtcaacgagtgcaacatctcccctcccgtgtgcaagaacgggggcagctgcaccaacgag
gtgggcacctaccagtgctcctgcaggccagcctacactgggcagaactgtgagcacctc
tacgtgccctgcaacccctcgccctgccagaacgggggcacctgccgccagatcggggac
accacctacgactgcacctgcctgccagggttcacggggcagaactgtgaggagaacatc
aacgactgcccgggcaacaactgcaagaatgggggcacctgcgtggatggcgtcaacacc
tacaactgccagtgcccacctgagtggacaggtcagtactgcaccgaggacgtggacgag
tgccagctgatgcccaacgcctgccagaacggcggcacctgccacaacaaccacggcggc
tacaactgcgtctgcgtcaacggctggacgggcgaggactgcagcgagaacatcgacgac
tgcgccatggccgcctgcttccacggggccacctgccacgaccgggtggcctccttctac
tgcgagtgcccccacggccgcacaggtttgctgtgccacctggacgatgcctgcatcagc
aacccctgcaacgagggctccaactgcgacaccaaccccgtcaatggcaaagccatctgc
acgtgtccctcggggtacatggggccagcctgcaaccaggatgtggacgagtgctctctg
ggagccaacccatgtgagcacgcggggaagtgcatcaacacccaggggtccttccagtgc
cagtgtctgcagggctactcaggcccccgctgcgagatcgatgtcaatgagtgcctctcc
aacccctgccagaatgatgccacctgcctggaccagattggggagttccagtgcatctgc
atgcccgggtacgagggggtttactgcgagatcaacacggacgagtgcgccagcagcccc
tgcctgcacaacggcaactgcctggacaagatcaacgagttccactgcgagtgccccact
ggcttcaacgggcacctgtgccagtttgacatcgacgagtgtgccagcaccccctgcaag
aacggtgccaagtgcgtggacggccccaacacctacagctgcgagtgcactgaaggtttc
acgggcgctcactgcgaggttgacatcgatgagtgtgaccctgacccgtgccactacggg
acctgcaaggacagcattgcctccttcacctgcctctgccagcctggctacacgggccac
cgctgtgacatcaacatcaacgagtgccagagccagccctgcaaaaacggggggacctgc
caggacaggaacaacgcctacaactgcatctgcctcaaagggaccacgggtcccaactgt
gagatcaacctggacgactgtgccagcaatccctgcgactacggcaagtgcatcgacaag
atcaatggctacgagtgcacctgcgagccggggtacacagggcgcatgtgcaacatcaac
attgacgagtgtgccagcagcccctgccacaacgggggcacctgcaaggatggcatcaat
ggcttcacctgcctgtgccccgagggcttccacgaccccaagtgcctgtctgaagtgaat
gagtgcaacagcaacccctgcatccatgggaaatgccacgatggattgaatggctacaag
tgtgactgtgaccctggctggagtgggacaaactgtgacattaacaacaacgagtgtgaa
tccaatccctgcatgaacggtggcacctgcaaggacatgaccagtggctacatctgcacc
tgcagggagggcttcagtggccccaactgccagaccaacatcaatgaatgtgcttccaac
ccctgcctgaaccagggcacgtgcatcgatgatgttgctggctacacctgcaactgcctc
ctgccctacacaggagccacctgtgaggacgtgctggccccctgtgctggcagcccctgc
aagaacggtggcgagtgccaggagtcagaggactacaagagcttctcctgcagttgcccc
cctggctggcaaggtcagacctgtgagattgacatcaatgagtgtgtgaagagcccctgc
aggaacggggccacgtgccagaacaccaacgggagctaccgctgcgcctgccggaccggc
ttctccggccgcaactgcgacaccgacatcgacgactgcaagcccaacccgtgccacaac
ggtggctcctgctccgatggcattggcacgttcttctgcgagtgcctggctggtttccgc
gggcccaagtgcgaggaggacatcaatgagtgcgccagcaacccctgcaagaacggggcc
aactgcaccgactgcgtcaacagctacacctgcacctgcccctcgggcttcagcggcatc
cactgcgagaacaacacccctgactgcacagagagctcctgcttcaacggtgggacgtgc
gtggatggcatcaacaccttcacctgtgtgtgcctgcccggcttcacgggcagctactgc
gagcacaacatcaatgagtgtgactccaagccgtgcctgaacgggggcacgtgtcaggac
agctacggcacgtacaagtgcacctgtccccagggatacaccgggctcaactgccagaac
ctggtgcgttggtgtgactcctcgccctgcaaaaacgggggcaagtgctggcagaccagc
aacctgtaccactgtgagtgcaacagcggctggacggggctctactgcgacgtccccagc
gtgtcctgcgaggtggctgctaagcagcaaggtatcgacgtagcacatctctgcaggaac
tcggggctctgtgttgacactggcaacactcacttctgccgctgccaagccggctacacc
ggcagctactgcgaggagcaggtggatgagtgctcccccaacccctgccagaacggagcc
acctgcacagactacctgggaggctactcctgcgagtgtgtggctggttatcatggagtt
aactgctcagaggagatcaatgaatgcttgtcccacccatgccagaatggaggaacctgc
atcgatctcatcaatacctacaaatgctcctgccccagaggaactcaaggggtgcactgt
gagatcaatgtggatgactgcagccctttctttgatcctgtcaccctggggcccaagtgc
tttaacaatggcaagtgcaaggatcgggtaggtggctacagctgcatctgcccccctggc
tttgtaggggagcgctgcgagggagatgtcaacgagtgcctgtccaacccctgcgacgcc
cgcggcacccagaactgcgtgcagcgggtcaacgactacaaatgcgagtgcagacctggc
tatgcaggccggcgctgtgacaccgtggtggatggctgcaaaggcaaaccctgcaggaat
gggggaacctgtgcagttgccagcaacaccggccgtggcttcatctgcaagtgccccccg
ggattcgtgggtgccacctgcgagaacgactcccgcacctgtgggaacctgcactgcctg
aacggaggcacctgcatctccatccacaagagctccaagtgcatgtgcacgccggccttc
acgggccccgagtgccagtacccggccagcagcccctgcacctccaacccctgctacaac
ggcggcacctgcgagttcttcagcgacgcctcccccttctaccgctgcaactgccccgcc
aacttcaacggcctcaactgccacatcctggacttcgacttccagggcggcgtggggcag
gacatcatcccccccaaaatcgaggagaagtgcgagatcgccgtgtgcgccgggttcgcc
ggcaacaagatctgcgacgggaaatgcaacaaccacgcctgcggctgggacggcggcgac
tgctccctcaacttcaacgacccctggaagaactgctcccagtccctgcagtgctggaag
tatttcaatgatggcaagtgtgactctcagtgcaacaacgctggctgcctctacgatggg
tttgactgccagaagtacgaggggcagtgcaaccctctgtatgaccagtactgcaaagat
cacttctcggatggtcactgcgaccagggctgcaacaattttgagtgcgagtgggatggt
ctggactgtgccaacaacatgccagagaagctggcagatggcacgctggtggtggtggtc
ctcatcacccccgagaacctgaagaacaactccttcaacttcctgcgggagctgagccgt
gtgctgcacaccaacgtggtcttcaagaagaacgccaagggggagtacatgatcttccca
tactatggcaatgaggaggagctgaaaaaacattacatcaagaggtccacagaggactgg
tctgatatgcccagtgctgtcatcaacaaagtgaagagcagcctctactccagggctggc
aggaggcagaagagggagctcgaccagatggacatcagaggatccatcgtctacttggaa
attgataaccgccagtgcatccagtcatcctcccagtgcttccagagtgccactgatgtg
gcagcattcctgggagccttggcctcccttggcaacctgaacataccctacaaaatagaa
gctgtcaaaagtgaaacagccgagcccacgaagaactcccagctgtatcctatgtacgtg
gtgggggctgcgctggtcttgctcgccttcatcgggctgggggtgctggtgtctcgcaag
cgccgcagggagcatgggcagctttggttccctgaaggcttcaaagtgacagagtccagc
aagaagaagcgacgggagcccctcggggaggattctgtcggactgaaacccctcaaaaag
gcttcggacggcacgctgatggatgacaaccagaacgagtggggtgatgaggagaccttg
gacaccaagaagttcaggtttgaggagcaggcgatgctgccggacacggatgaccagacg
gatcacaggcagtggacacagcagcacctggacgccgctgacctgcgcatttcctccatg
gcccccacacctccacagggggaaatcgatgctgactgcatggatgtcaacgtcagaggg
ccagatggcttcacccccctcatgatcgcctcgtgcagcgggggagggctggagaccggc
aacagcgaggaggaggacgacgctccggccgtcatctcggacttcatctaccagggcgcc
agcctgcacaaccagacggaccgcacgggcgagacggcgctgcacctggccgccaggtac
tcgcgctcggacgcggccaagcgcctgctggaggccagcgccgatgccaacatccaggac
aacatgggccggacgcccctccacgccgccgtctcggccgacgcacaaggcgttttccag
atcctgattaggaacagggcaacagacctggatgcccgcatgcatgacgggaccactccc
ctgatcctggctgctcgtttggctgtggaggggatgctggatgacctcatcaactgccac
gctgacgtcaacgccgtggatgatttaggcaagtcagccctgcactgggcagctgctgtg
aataatgtggaagctgcaatggtcctcctgaagaatggtgccaataaggacatgcagaat
aataaggaggagaccccactgttcctggcagccagagaagggagctacgaaaccgccaag
gtcctgctggaccattttgccaaccgggacatcacggaccacatggaccggctgccgcgg
gacatcgcccaggagcgcatgcaccacgacatcgtgcggctgctggacgagtacaacctg
gtgcgcagccccacgctgcacaacgggcccctgggggcacccaccctgtcccccccgctc
tgctcccccagcagctacatcggcaacctcaaacccgccgtgcagggcaagaaggccagg
aagccgagcaccaaggggctgagctgcaacggcaaggatgccaaagatctcaaagcccgc
aggaaaaagtcgcaggacggaaaagggtgtctgctggacggctccggggtgctgtcgccg
gtggactccctggagtcgccgcacgggtacctctcggacgtggcctcgcccccgctgatg
acctctccgttccagcagtccccctccatgcctctgaaccacctgccaggcatgcccgac
gcccacctgagcatcaaccacctcaacatggcgggcaagcaggatatggccatgggcggc
tccggcaggatgggcttcgactcggtgccgccgcgcctgtcgcacctgccggtgtccagc
cccagcacggccatgagcagtgcccccatgagcttctcggtgggcagcggggccgggctg
aacgggcagtgtgactggctcagccggctgcagaacggcatggtgcagggccagtacaac
cccctgagaggcaacctgcagcccggggcgcaccagcagccccaaaacctgcagcacggc
atgatgggctcgctgcacaacgggctgcccagcaccagcctgtcgcagatgatgagctac
caggccatgcccaacacgcggctggcgtcgcagccccacctgatgcagagccagcagctc
cagcagatgcagcagcagcagcagcagcagcagcagcagcagcaaaacctgcagcagccc
aacctgcagcccccgccgcagcagcagccgccgccgcagccgccgcagcagcaccagcag
cagcaccacaaccccggctccaacgggatgggccagaatttcctcggtacggagctgagc
cagcccgagctgcagccggtgagcggcggcgccatggccgtgcacaccatcctgccgcag
gattcccagctgctgcccacctccctgccctcctccctcgcccagcccatgaccagcacg
cagttcctgaccccaccttcccagcacagttattcctcccccttggacaacacccccagc
caccagctgcaggtgcccgaccaccctttcctgacgccgtcgccggagtcgcccgaccag
tggtccagctcctctcctcactccaacgtgtccgactggtccgagggcatctccagccct
cccacgagtatgcagtcacagatgggacacatccccgaggccttcaagtaa
DBGET
integrated database retrieval system
