Ficedula albicollis (collared flycatcher): 101808315
Help
Entry
101808315 CDS
T02815
Name
(RefSeq) hyaluronidase-1-like
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab00531
Glycosaminoglycan degradation
fab01100
Metabolic pathways
fab04142
Lysosome
Module
fab_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
101808315
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
101808315
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
fab02042
]
101808315
00536 Glycosaminoglycan binding proteins [BR:
fab00536
]
101808315
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
fab00537
]
101808315
Enzymes [BR:
fab01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
101808315
Bacterial toxins [BR:
fab02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
101808315
Glycosaminoglycan binding proteins [BR:
fab00536
]
Heparan sulfate / Heparin
Enzymes
101808315
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
fab00537
]
Enzymes
101808315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_56
DL-JAG_EGF-like
JAG1-like_EGF2
EGF
Motif
Other DBs
NCBI-GeneID:
101808315
NCBI-ProteinID:
XP_005039370
LinkDB
All DBs
Position
1A:complement(22099750..22107701)
Genome browser
AA seq
478 aa
AA seq
DB search
MGVGVKQLAVLALLALADAPLPKPARAPLVLHKPFLVLWNAPTEQCRLRYRVDLDLGVFD
IASNVNETLSGSNVTIFYHTHLGYYPYYSDNGDPVNGGLPQNESLIRHLSKAKSDIDYCI
PMKKFQGLAVIDWENWRPQWDRNWGNKSIYRNKSLEIVRRRHPRWSEDKIRKVAKEEFEN
AGRSFMNNTILLAEHMRPNGLWGYYLYPDCYNYDYKEHPQTYTGKCPPIESFRNDLLLWL
WKESTALYPSIYLDYILKSSPNALKFVHFRVKEAIRVASIARRDYVLPVFVYSRPFYAYT
FHVLTERDLVNTIGESAALGAAGVVLWGSMQYASSKESCLTVKQYIDGPLGHYVINVTSA
AKLCSKVLCKKNGRCIRKHSDSSAYLHLSPTDFKIHHHHSERGSRFHVTGKPSLETIEAM
KQRFICQCYQGWTGIFCELPDQRLLEHWVHVVFSKSREQSLFIFLLGAMQLLLLSSAH
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttggggtgaagcagctggcagtgctggccctgctggccctggctgatgccccc
ctgcccaagccagcccgcgcccctctggttctgcacaagcccttcctggtgctctggaac
gcgcccaccgagcagtgccggctgcgctacagggtggacctggacctcggggtgtttgac
atcgcatccaacgtcaacgagaccctcagtggatccaacgtgaccatcttctaccacact
catttgggatactatccctactactcagacaatggagatcccgttaacggagggctgccc
cagaacgaaagtcttatcagacacctgagcaaagcaaagtctgacattgactattgcata
cccatgaagaaatttcaggggcttgcggtcattgactgggaaaactggaggccccagtgg
gataggaactggggcaataaaagcatttatagaaataaatctctcgagattgttaggaga
cggcatcctcggtggtcagaggacaaaattaggaaagtggctaaagaggaatttgaaaat
gctggcaggagttttatgaataacaccatccttctggctgagcacatgagaccaaatggt
ttgtggggttactacctttacccagactgctacaactacgattacaaagagcacccccaa
acctacacagggaaatgcccacccatcgagtctttccgcaatgacctcctcctctggctc
tggaaggaaagcactgctctctacccttctatatacctggattatatactcaagtcaagt
ccaaacgcactgaaatttgtccactttcgggttaaagaggcaatacgtgttgcctcaatt
gctagaagagactatgttttgcctgtgtttgtttactccagaccattttatgcctatact
tttcatgttttaacagagagggatctggtcaacaccattggggaaagtgcagctctggga
gcagctggagttgttctctggggcagtatgcaatatgccagctcaaaggagagctgctta
acggtgaagcagtacattgatggacctttgggacattatgtcatcaatgtgacctcagca
gccaaactctgcagcaaagtcctgtgcaagaagaatggaagatgtatccgcaaacacagc
gactcttctgcttacctgcatttgtcacccactgattttaagatccaccaccatcactca
gagaggggctccaggttccacgtgactggtaaacccagcctggagactattgaagccatg
aagcagagatttatttgtcagtgttaccagggctggacaggaatattttgtgaattgcct
gaccaaaggctattggaacactgggttcatgtagtatttagtaaatcaagagaacaaagc
ctttttatcttcctcttaggagccatgcagcttcttctgctttcttctgcacattaa
DBGET
integrated database retrieval system
