Ficedula albicollis (collared flycatcher): 101814017
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Entry
101814017 CDS
T02815
Symbol
GGPS1
Name
(RefSeq) geranylgeranyl diphosphate synthase 1
KO
K00804
geranylgeranyl diphosphate synthase, type III [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab00900
Terpenoid backbone biosynthesis
fab01100
Metabolic pathways
Module
fab_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
101814017 (GGPS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
fab01006
]
101814017 (GGPS1)
Enzymes [BR:
fab01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
101814017 (GGPS1)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
101814017 (GGPS1)
2.5.1.29 geranylgeranyl diphosphate synthase
101814017 (GGPS1)
Prenyltransferases [BR:
fab01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
101814017 (GGPS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
101814017
NCBI-ProteinID:
XP_005043871
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All DBs
Position
3:44774374..44793192
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AA seq
299 aa
AA seq
DB search
MDGMDETSKKILEPYQYLLQLPGKQVRTKLSQAFNHWLNVPEDKIQVIIEVTEMLHNASL
LVDDIEDNSKLRRGFPVAHSIYGIPSVINCANYVYFLGLEKVLTLDHPDAVKVFTRQLLE
LHKGQGLDIYWRDTYTCPTEAEYKAMVLQKTGGLFGLAVGLMQLFSNYKKDLKPLLNTLG
LFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTENI
DIKKYCVHYLENVGSFEYTRNTLKELESEAYKQIELLGGNPELVALVQQLSKMFRETEN
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggatgggatggatgaaacatctaaaaaaatcctagagccataccagtatttgcttcaa
ctaccaggtaagcaagtgagaaccaaactgtcacaggcctttaatcactggctgaatgtt
ccggaagataaaatacaggttatcattgaagtgacagagatgttgcacaatgcaagccta
cttgtggatgatattgaagataactcaaagctacgacggggctttccggtggcacacagt
atctatggaattccatctgtaatcaactgtgctaattatgtttattttcttggcttagag
aaggttttaacccttgatcatccagatgctgttaaagtttttacccgtcaacttctggaa
ctccataaaggtcaaggcttggatatttactggagggatacttacacctgtcccacagag
gctgagtataaagcaatggtactgcaaaagacaggcggtctctttggattagctgtaggc
ctcatgcagctattctcaaattataaaaaagacttaaagccacttcttaacacacttggt
ctcttcttccaaataagagatgactacgccaacttgcactccaaagaatatagtgagaac
aagagtttttgtgaagacttaactgagggcaagttctcattcccaaccattcatgcaatt
tggtcaagacctgaaagcactcaggtgcaaaacattttacgtcaaaggacggagaacata
gatataaaaaaatactgtgtacattaccttgaaaatgttggctcctttgagtacactcgg
aatacattgaaagagcttgaatctgaagcctataaacaaattgaattgcttgggggaaac
cctgagcttgtagcactagttcaacagctgagcaaaatgttcagagaaactgaaaattaa
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