Ficedula albicollis (collared flycatcher): 101816626
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Entry
101816626 CDS
T02815
Symbol
SPAM1
Name
(RefSeq) hyaluronidase PH-20
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab00531
Glycosaminoglycan degradation
fab01100
Metabolic pathways
fab04142
Lysosome
Module
fab_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
101816626 (SPAM1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
101816626 (SPAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
fab02042
]
101816626 (SPAM1)
00536 Glycosaminoglycan binding proteins [BR:
fab00536
]
101816626 (SPAM1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
fab00537
]
101816626 (SPAM1)
Enzymes [BR:
fab01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
101816626 (SPAM1)
Bacterial toxins [BR:
fab02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
101816626 (SPAM1)
Glycosaminoglycan binding proteins [BR:
fab00536
]
Heparan sulfate / Heparin
Enzymes
101816626 (SPAM1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
fab00537
]
Enzymes
101816626 (SPAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_56
Motif
Other DBs
NCBI-GeneID:
101816626
NCBI-ProteinID:
XP_005039324
UniProt:
A0A803V5Q4
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All DBs
Position
1A:complement(22036280..22069788)
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AA seq
587 aa
AA seq
DB search
MKTVRQRQSFGICVTCTYPVAPGVVFATLLVSCCSSLNIRARPLVSNSPFLSIWNAPTEL
CTERTGVQLDMNFFPLIGSTLKTSIGQNITLFYPDRLGYYPYKNEITGEAFNGGLPQLSL
LENHLKKAKEDIQFYIPSDEQLGLAVIDWENWRPVWIRNWGSKDIYRQESTELVQQRDLS
LSEAEARNIAKTEFEFAAKSFMLETLKLGIEMKPNRLWGYYLYPDCYNYDYKQNPHNYTG
TCLDIEIERNNELNWLWEKSTALFPSIYLETALKSSRNAQLFVRNRVQEAIRTSYVSNSS
HPLPVFVYTRPVFTDVYEEYLSEDDLVNTIGESAALGASGIVIWGDMNLTQNKNTCRTLD
NYLRRTLTPYLINVTMAARICSQVLCHDSGACARKKWNSSDYLHLNPENIAIQMTKDGKY
TFQGQPSYKDLQTFIEKFDCHCYAGQSCEPTADINDIHYVHACISEDICIQISSNSLSNI
EASEEKILSNRTAFSFTSESKVTLSTHSEIEDFQSTFGNNTFNTTTAEYNTVSAASSYDL
EENDTRTFSSSSSYKIRMFNLFHLILLLRTLIQMTPESENILFPNYI
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactgtaagacaaaggcaaagttttggcatctgtgttacctgtacgtatcctgta
gcacctggtgtggtgtttgccactcttctagtttcttgctgctcatctctgaatataaga
gctcgtccacttgtttctaattcacctttcctttctatctggaatgctcctacagaactt
tgtactgaaaggactggagtgcagctggacatgaatttttttcctctaattgggagcaca
ctaaagacatccattgggcaaaacatcactctcttctatccagacaggcttggctactac
ccttacaaaaatgaaatcacaggagaggcattcaatggaggactccctcaactatcgctg
ctggagaatcatttaaaaaaagccaaggaggacatccaattctacattccttcagatgaa
cagcttggattggctgtcattgactgggaaaactggagacctgtgtggataaggaactgg
ggatcaaaagatatttatagacaggaatccactgagctagttcagcagagagatctcagt
ctatcagaagccgaagccagaaatatagctaaaacagaatttgaatttgcagcaaaatca
tttatgttggaaactttgaagctgggcatagaaatgaaaccaaatcgtctgtggggatat
tacctttatccagactgttataactatgattacaaacaaaacccacacaattatacagga
acctgtttagatattgaaatagaaagaaataatgagcttaactggttgtgggagaaaagc
acagcactttttccatctatctatctagagacagccttaaaatcttccagaaatgctcaa
ctctttgttcgtaacagagttcaagaagccattagaacttcctatgtctctaactctagt
catccccttccagtttttgtatacacacgtccagtattcacagatgtctatgaggaatat
ctctctgaggatgacctggtaaataccattggagaatctgctgcactgggtgcttctgga
attgtgatatggggtgatatgaatttaacacaaaataagaacacctgtagaactctggac
aactaccttaggaggactttgaccccatacctcatcaacgtcacaatggcagccagaata
tgtagccaagtgctatgccacgactctggtgcttgtgcacggaaaaaatggaattccagt
gactaccttcacttgaaccctgagaatattgcaattcaaatgacaaaggatggaaaatac
acttttcaagggcaaccatcatataaggatctgcaaacattcatagaaaaatttgattgc
cattgttatgcagggcagagctgtgaacctacagctgatataaatgacatccattatgtc
catgcttgcatttcagaagatatttgcattcagatatcctcaaattcactttctaacata
gaagcctctgaagaaaagatcctgtctaacagaactgcattttcatttacctctgagagt
aaggtgacattatctacacattctgaaatagaagatttccaatctacctttggaaataat
acatttaatacaacaactgcagaatacaacactgtttcagctgccagtagctatgattta
gaagaaaatgatactcgtactttcagtagttcttcatcctataagataaggatgtttaat
ctgtttcacttaattctacttttgagaaccttaatacaaatgacccctgaaagtgagaat
atccttttccctaactatatttga
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