Ficedula albicollis (collared flycatcher): 101817820
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Entry
101817820 CDS
T02815
Symbol
HNF1A, HNFAL
Name
(RefSeq) HNF1 homeobox A
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fab03000
]
101817820 (HNF1A)
Transcription factors [BR:
fab03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
101817820 (HNF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
Homeobox_KN
NanE
YebO
Motif
Other DBs
NCBI-GeneID:
101817820
NCBI-ProteinID:
XP_005054885
UniProt:
U3JYI0
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Position
15:11499153..11516120
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AA seq
634 aa
AA seq
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MVSKLTHLQVELLEALLESGLTKETLIKALSEAEPYGLQSESQRAINALQTEKGEPCPDI
PNLPNGMGEARVSEDETSDDGEEFTPPIMKELENLSPEEAAHQKAVVERLLQEDPWRVAK
MVKSYLQQHNIPQREVVDTTGLNQSHLSQHLNKGTPMKTQKRAALYTWYVRKQREVAQQF
THAGQGILTDEPMGDDLPTKKGRRNRFKWGPASQQILFQAYERQKNPSKEEREALVEECN
RAECIQRGVSPSQAQGLGSNLVTEVRVYNWFANRRKEEAFRHKLAMDTFSGPQPTSAPPL
TPHSSSSLQPPPALSPSKVHGVRYNQQPASEAESSSSNHHGNSSMVTTQTILHQVSPPGL
EPSQNLLSTDTKLVSAPGGTLPPVSTLTALHSLEQSPHTLSQQTQNLIMASLPGVMAIGA
GETPSLAPAFTNTGASTLVIGLASTQPQSVPVINSMGSSLTTLQPVQFSQQLHPSYQQPL
MQQVQSHINQSPFMATMAQIQNPHTLYGPKSEVTQYTHTGLLPQTMVITDTANLSALTNL
TPTKQAFTPDSETHTESGMHTPVSQAPTIHLQNQDTTIQHLQPGPRLTSSPAVSSSSLVL
YQSSDSTNSHSQLLPSTHNVIETFISTQMASSTQ
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggtctcgaagctgactcatctccaagtggagctgctggaagcgctgctggagtcgggg
ctgaccaaggagaccttgatcaaggcactgagcgaagcggaaccctacgggctgcagagc
gaaagccagcgcgctatcaatgccctccagactgagaaaggggagccctgtcccgacatc
cccaacctccccaacggaatgggggaggccagggtgtccgaagatgaaacctcagatgac
ggagaggaatttacccctccaataatgaaggagctggaaaacttgagcccagaggaggct
gctcaccagaaggctgtggtggaaagactattacaagaggatccctggcgagtagcaaag
atggtgaagtcttacctccagcagcacaacatcccccagcgtgaggtggtggacaccact
ggtttgaaccaatcccacctctcccaacacctcaacaagggcactcccatgaagacccaa
aaacgggcagccctgtacacctggtatgtccggaagcagcgagaggtggcccagcaattc
acacacgctggccagggtatactgacagatgagcccatgggagatgatctgcccaccaag
aagggaagaagaaaccgctttaagtggggtcctgcctcacaacagatcctgttccaagcc
tatgagaggcagaaaaaccccagcaaagaagagagggaggcactggtggaagagtgcaac
agggcagagtgtattcagagaggtgtttccccatctcaggcccagggactgggctcaaac
ctggtgacagaggtcagagtttacaactggtttgccaatcgcaggaaggaggaggcgttc
cggcacaagctggccatggacaccttcagcggaccacagcccacctctgcccctcctcta
accccccacagctcctcctccctccagccaccacctgctctctcacccagcaaagttcat
ggagtaaggtacaaccagcagccagccagcgaggcagagtcctccagcagcaaccaccac
gggaacagctccatggtgaccacccaaaccatcctgcatcaggtttctccccctggactg
gagcccagccagaacctgctgagcacagacactaagctggtatcagctcctggaggaact
ctccctcctgtcagcaccctgactgccctgcacagcctagagcaaagcccacacacgctg
agccagcagacccagaacctgatcatggcatccctgccgggggtcatggcgatcggggcg
ggcgagaccccgtccctggcgcccgccttcaccaacacgggagcctccaccctggtgatc
ggcctggcctcaacccagccccagagtgttcctgtaataaacagcatggggagcagcctc
actaccctgcagcccgtccagttctcccagcaactgcatccatcctaccagcagcccctc
atgcagcaagtccagagccacatcaaccagagccccttcatggcgaccatggcgcagata
cagaaccctcacactctctatggccccaaatctgaagtgactcaatacacacacacaggc
ctcttaccacaaaccatggtgataacagacacagccaatctcagcgccctgaccaacctg
acaccaactaagcaggcattcacacctgactcagagactcacaccgagtctgggatgcac
acaccagtgtcacaggcaccaacaatccatctacagaaccaagacacaaccatccagcac
cttcagcctggcccacgcctcacctcaagccctgctgtgtcctccagcagcctggtgctg
taccaaagctctgactccaccaacagccacagccagctgctgccatccactcacaacgtc
attgagaccttcatctccacacagatggcatcttccacccagtaa
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