Ficedula albicollis (collared flycatcher): 101818610
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Entry
101818610 CDS
T02815
Symbol
GRIN1
Name
(RefSeq) glutamate ionotropic receptor NMDA type subunit 1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04020
Calcium signaling pathway
fab04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
101818610 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
101818610 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
fab04040
]
101818610 (GRIN1)
Ion channels [BR:
fab04040
]
Ligand-gated channels
Glutamate (ionotropic)
101818610 (GRIN1)
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Ion_trans_2
Peripla_BP_6
DUF6724
Motif
Other DBs
NCBI-GeneID:
101818610
NCBI-ProteinID:
XP_016158014
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Position
17:complement(804548..845101)
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AA seq
946 aa
AA seq
DB search
MSIYSDKSIHLSFLRTVPPYSHQANVWFEMMRVFNWNHVILIVSDDHEGRAAQKKLETLL
EEKESKSKKRNYENLDQLSYDNKRGPKAEKVLQFDPGTKNVTSLLLEAKELEARVIILSA
SEDDAATVYRSAAMLNMTGSGYVWLGGEREISGNALRYAPDGVIGLQLINGKNESAHISD
AVAVVAQAVHDLFEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYSEGVTGRVEFNED
GDRKFANYSIMNLQNRKLVQVGIYNGSNVLTNDRKIIWPGGETEKPQGYQMSTKLKIVTI
HQEPFVYVKPTQADGTCREEFTINGDPVKKVFCTGPNETIPGRPTVALCCYGFCIDLLIR
LAGVMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQ
YIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSP
FGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVA
SYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRH
MEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRKD
SPWKQNVSLAILKSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGIV
AGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQRELRRRSKCIPEHALRTSGIHF
GYPRAVAEPDLVSPSPVGKVTLIGTKAIGEDSLPAPGAERGWAPRPAAPAPWRLVLPACA
NQDRKSGRAEPDPKKKATFRSITSTLASSFKRRRSSKDTPCRMVPQECQRDRLAPWSQDS
PGKLPPHSERPSAHHHPSCTASPRHIIPTAPGGDACVPHRQLLQLE
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgtctatatattctgataagagcatccacctgtcctttttgcgcacggtcccaccttac
tctcaccaggccaatgtctggttcgagatgatgagagtcttcaactggaaccacgtcatt
ctgatagtcagcgacgaccacgagggtcgtgctgcacaaaagaagctggagaccctcctg
gaggagaaagagtccaagagtaaaaaaaggaactatgaaaacctcgaccaactttcctat
gacaacaagcgaggacccaaggctgagaaagtgcttcagtttgaccccggaaccaaaaac
gtgacatcgctgctgctggaggcgaaggagctggaggccagggtcatcatcctctctgcc
agcgaggatgacgcggccacggtgtacagatcagcggccatgctcaacatgacgggctcg
ggctacgtgtggctggggggcgagcgggagatctcgggcaacgccctgcgctacgccccg
gacggagtgatcggtttgcagctcatcaatggcaagaacgagtcagcccacatcagtgat
gctgtggctgtggtggcccaggctgtgcacgacttgtttgagaaggagaatatcacagac
ccaccgcggggctgcgtgggcaacaccaacatctggaagacaggacccctttttaagagg
gtgttgatgtcctccaagtactcagagggtgtcactggccgggtggagttcaacgaggat
ggggacaggaaatttgccaactacagcatcatgaacctgcagaatcggaaactggtccag
gttgggatttacaacggcagcaatgtcctgaccaatgacaggaagatcatctggccaggg
ggggaaactgagaaacctcaaggctatcagatgtcaaccaagttgaagattgtgaccatc
caccaagagccctttgtgtatgtgaagcccactcaggcagatgggacctgcagggaagaa
ttcaccatcaatggagatcctgttaaaaaggtcttctgcactggacccaatgagaccatc
ccaggccgccccaccgtggcactgtgctgctacggcttctgcatcgacctgctcatccgc
ctggcaggggtgatgaacttcacctatgaggttcacctggtggctgatggtaaatttggt
acccaagagcgggtgaacaacagcaacaagaaggagtggaacgggatgatgggggagctg
ctgagcggccaggcagacatgattgtggctcccctcaccatcaacaatgagcgggctcag
tacatcgagttctccaagcccttcaagtaccagggcctcaccatcctcgtgaagaaggaa
atccctcgcagcaccctggactcgttcatgcagcccttccagagcacgctctggctgctg
gtggggctgtctgtgcatgtggtggccgtgatgttgtacctcttagaccgattcagccca
tttggccggttcaaagtaaacagtgaggaggaggaggaagatgccctgactctctcctca
gccatgtggttctcctggggagtcctgctgaactctggcattggagaaggtgctccccgg
agtttctctgcccgtatccttggcatggtgtgggctggctttgctatgatcattgtggct
tcatacactgccaacctggcagccttcctggtgttagaccgacctgaggagaggatcacg
ggcattaatgacccccggctgcgcaacccctcggataagttcatctacgccacggtgaag
cagagctctgtggacatctacttccgacggcaggtggagctgagcaccatgtacaggcac
atggagaagcacaactacgagagcgctgccgaagccatccaggcagtgagggacaacaag
ctccacgccttcatctgggactcggcagtgctggagttcgaggcctcccagaagtgtgac
ctggtgaccacgggggagctcttcttccgctccggcttcgggatcgggatgcgcaaggac
agcccctggaagcagaacgtctccctcgccatcctcaagtcccacgagaatggcttcatg
gaggatttggacaagacttgggtgaggtatcaagagtgtgattcccgtagcaatgcccca
gcaacactcacctttgaaaatatggcaggtgtgttcatgctggtggctggaggtattgtt
gccgggatatttttaatattcatagagatagcttacaaaagacataaggacgcacggagg
aagcagatgcagctggcgtttgcggccgttaatgtgtggaggaaaaacctgcagagagaa
ctgagaaggaggagcaaatgtatccccgagcatgctctacgcaccagcgggatacatttt
ggttacccccgtgcggtagcagagccagacctggtctctccgtcccccgtcggaaaggtc
acactcattggcacgaaagcaattggggaggactcgctgccagcgcccggcgccgagcgc
ggctgggccccccggcccgcggcccccgcaccatggcggctggtgctcccagcctgcgcc
aaccaggatagaaaaagtggtagagcagaacctgaccctaaaaagaaagccacttttagg
tccatcacctccaccctggcctccagcttcaagagacgtaggtcctccaaggatacgccc
tgcagaatggtccctcaggagtgccagagagacaggctggcaccatggagccaagacagc
cctgggaagcttccaccccactctgaacgtcctagcgcccaccatcacccgagctgcaca
gcctctccgcggcacatcatccccaccgccccaggaggagatgcatgtgttccccatagg
cagctcctgcaactcgagtag
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