Frankia alni: FRAAL1416
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Entry
FRAAL1416 CDS
T00384
Symbol
pydB
Name
(GenBank) D-hydantoinase (Dihydropyrimidinase) (DHPase)
KO
K01464
dihydropyrimidinase [EC:
3.5.2.2
]
Organism
fal
Frankia alni
Pathway
fal00240
Pyrimidine metabolism
fal00410
beta-Alanine metabolism
fal00770
Pantothenate and CoA biosynthesis
fal01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fal00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
FRAAL1416 (pydB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
FRAAL1416 (pydB)
09108 Metabolism of cofactors and vitamins
00770 Pantothenate and CoA biosynthesis
FRAAL1416 (pydB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fal04147
]
FRAAL1416 (pydB)
Enzymes [BR:
fal01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.2 In cyclic amides
3.5.2.2 dihydropyrimidinase
FRAAL1416 (pydB)
Exosome [BR:
fal04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
FRAAL1416 (pydB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidohydro_1
Amidohydro_3
Amidohydro_2
Motif
Other DBs
NCBI-ProteinID:
CAJ60074
RhizoBase:
FRAAL1416
UniProt:
Q0RQU9
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All DBs
Position
1516231..1517700
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AA seq
489 aa
AA seq
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MRTLITGGTLVGPLGATPTDVLVDGETVAALLAPPVPIDPSARGAAGAATAAASGTGRPV
VDADRVIDATGKYVIPGGVDVHTHMELPFGGTAASDTFATGSAAAAWGGTTTIVDFAVQR
TGEVVEEGLTAWHAKAAGQCAIDYGFHMIMGGVDEAALKAMDSLVAHEGVTSFKLFMAYP
GVFFSDDGQILRAMQRAAESGATIMMHAENGLAIDVLVAQALARGDTDPIHHGLTRPPAL
EGEATHRASVLAQVAGNPPLYFVHLSASEALGVISAARTAGRNVFAETCPQYLYLSLEEH
LGAPGFEGARYVASPPLRTNTAPHADDLWRGLRTDDLAVVSTDHCPFCLKEQKELGRGDF
SKIPNGIGTVEHRIDLIYQGVVTGKISLQRWVETCATTPARMFGLYPRKGVVAPGSDADI
VVYDPNATTTISAATHHMNLDHSAWEGFEIAGKVDTVLSRGSVVVSDGQFHGRAGHGRYV
PRGLSQYLR
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaggacgctcatcacgggtgggacgctggtcggaccgctcggcgcgaccccgaccgac
gtgctcgtcgacggcgagacggtggccgccctgctcgccccgccggtcccgatcgacccg
tccgcccggggcgcggccggcgccgcgacggcggcagcgagcggcaccggccggccggtg
gtcgacgccgatcgggtcatcgacgccaccggcaagtacgtcatcccgggcggggtcgac
gtgcacacccacatggagctgccgttcggcggcacagcggcctccgacacgttcgccacc
ggctcggccgccgcggcctggggcggcacgaccacgatcgtcgacttcgccgtgcagcgc
accggcgaggtcgtcgaggagggcctgaccgcctggcacgccaaggccgccgggcagtgc
gcgatcgactacggcttccacatgatcatgggtggggtcgacgaggccgcgctcaaggcg
atggactccctcgtcgcccacgagggcgtcaccagcttcaagctgttcatggcctacccg
ggcgtgttcttcagcgacgacggccagatcctgcgggcgatgcagcgcgccgccgagtcc
ggcgccacgatcatgatgcacgcggagaacggcctggccatcgacgtcctcgtcgcccag
gcgctggcccgcggcgacaccgatccgatccaccacggcctgaccagaccgccggcgctg
gagggcgaggccacccaccgggcgtccgtgctcgcccaggtcgccggcaaccccccgctg
tacttcgtgcacctgtccgcctccgaggccctcggagtgatcagcgccgcccgcaccgcc
gggcgcaacgtgttcgccgagacctgcccgcagtacctgtacctcagcctggaggagcat
ctcggcgcccccggcttcgagggcgccaggtacgtcgcctccccgccgctgcggacgaac
accgccccgcacgccgacgacctgtggcgcggcctgcgcaccgacgacctcgccgtcgtc
tccaccgaccactgcccgttctgcctcaaggagcagaaggagctcggccgcggcgacttc
tcgaagatccccaacgggatcgggaccgtcgagcaccgcatcgacctgatctaccaggga
gtcgtcaccgggaagatctcgctgcagcggtgggtcgagacctgcgcgaccaccccggcg
cggatgttcggcctctacccgcgcaagggtgtcgtcgcccccggctcggacgcggacatc
gtcgtctacgacccgaacgcgacgacgacgatcagcgccgccacccaccacatgaacctc
gaccactcggcctgggagggcttcgagatcgccgggaaggtcgacacggtgctctcccgc
ggatccgtcgtggtctccgacggccagttccacggccgcgccggccacggccgctacgtt
ccccgcggcctgtcccagtacctgcggtga
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