Flavobacterium ammoniigenes: GENT5_12360
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Entry
GENT5_12360 CDS
T08752
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
fan
Flavobacterium ammoniigenes
Brite
KEGG Orthology (KO) [BR:
fan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fan03009
]
GENT5_12360 (rimO)
Enzymes [BR:
fan01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
GENT5_12360 (rimO)
Ribosome biogenesis [BR:
fan03009
]
Prokaryotic type
ribosomal protein modification factors
GENT5_12360 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
BDB54931
LinkDB
All DBs
Position
complement(1375742..1377055)
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AA seq
437 aa
AA seq
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MRTKSLKKNKINVITLGCSKNIYDSEVLMGQLRASGKEVTHEAPEAEEGNIIVINTCGFI
DNAKAESVNMILEYADKKERGLVDKVFVTGCLSERYRPDLEKEIPNVDQFFGTTELPQLL
KALGADYKHELLGERLTTTPKNYAYLKIAEGCDRPCSFCAIPLMRGKHVSQPIEKLVKEA
EGLARDGVKELILIAQDLTYYGLDIYKKRNLAELLEALVKVEGIEWIRLHYAFPTGFPMD
VLEIMKREPKICNYIDIPLQHISDSILKSMKRGTTQAKTTQLLKDFRAAVPGMAIRTTLI
VGYPGETQEDFEILKDFVQEMKFDRMGCFAYSHEENTSAYLLEDDVPDTIKQERANEIME
LQSQISWDLNQEKVGQTFKCIIDRKEGGHFVGRTEFDSPDVDNEVLIDATKHYLKTGDFA
TIKIIEATEFDLYGEPV
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgagaacgaaatctttaaagaaaaataaaatcaatgtaattactcttggttgttccaaa
aacatctacgacagcgaggtcttaatgggacaattacgtgccagtggcaaagaagtaaca
cacgaggcgcctgaagcggaagaaggtaatattatcgtaattaatacctgtggatttatc
gataatgccaaggcagaatcggtgaatatgattttagaatatgccgataaaaaagaacgc
ggtttagtagataaggtatttgtcacaggatgtttatcagaaagataccgacctgattta
gaaaaggaaatcccgaatgtagatcagttttttggcacgaccgaattaccgcaacttttg
aaagctttaggagcagattataaacacgaactgttaggagaacgtttgactactactcca
aaaaattacgcttatttaaaaattgctgaaggttgtgacagaccctgtagtttttgtgct
attcctttaatgagaggaaaacacgtttcgcaacccattgaaaaattagtaaaagaagct
gaaggcttggcacgtgatggtgttaaagaacttattttaattgcacaggatttaacctat
tacggtcttgatatatacaaaaaaagaaatttagctgaactactagaagcgttagtaaaa
gtagaaggcattgaatggattcgtttgcattatgcctttcctaccggtttcccaatggac
gttttagagatcatgaagcgagagccgaaaatttgtaattacatagacattcctctgcag
cacatttcagattctatcttgaagtctatgaaacgtgggacaacacaggcaaaaacaact
caattattaaaagattttagagctgctgttcctggaatggcaattcgtactactttaatt
gtaggctatcctggtgaaacgcaagaagattttgaaattttaaaagattttgtacaagaa
atgaagtttgatcgaatgggttgttttgcttattctcacgaagaaaacacttctgcctat
ttattggaagatgatgttcctgatactatcaaacaagaacgcgccaatgaaattatggaa
ttacaatcgcaaatatcttgggacttgaaccaagaaaaagtaggtcagactttcaagtgc
attatcgatcgaaaagaaggtggtcattttgtaggacgtaccgaatttgacagccccgat
gtcgataatgaagttttaattgatgctaccaaacactatttgaaaacaggtgattttgca
acaataaaaattattgaagctactgaatttgatttgtacggagaacctgtttaa
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