Flavobacterium ammonificans: SHINM13_07890
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Entry
SHINM13_07890 CDS
T08737
Name
(GenBank) tetracycline resistance MFS efflux pump
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
fao
Flavobacterium ammonificans
Brite
KEGG Orthology (KO) [BR:
fao00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fao02000
]
SHINM13_07890
01504 Antimicrobial resistance genes [BR:
fao01504
]
SHINM13_07890
Transporters [BR:
fao02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
SHINM13_07890
Antimicrobial resistance genes [BR:
fao01504
]
Gene variants
Tetracycline resistance genes
Transporters
SHINM13_07890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
MFS_2
MFS_4
MFS_3
Motif
Other DBs
NCBI-ProteinID:
BDB56493
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Position
958787..959953
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AA seq
388 aa
AA seq
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MLIDITGWGIIIPVIPKLIKELIHGDISEAAKIGGWLTFAYAITQFLFAPLVGNLSDKFG
RRPIILISLFAFSLDYLLLAFAPTIEWLFVGRIIAGLTGASISTATAYIADVSTPENRAK
NFGMIGAAFGLGFIIGPVIGGLLGQFGARVPFYAAAGLCLLNFLYGYFILPESLVKENRR
EFDIKRANPIGALLHLKKYPKLIGLVIATFLLYVASHAVHSNWSFFTMYQFNWDEKMVGI
SLGVIGLLVGLVQGGLIRWINPKLGNEKSIYVGMALYTLGMFLFATATESWMMFVFLIPY
CLGGIAGPAMQAVISEQVPANEQGEIQGTMSSLMSASAIIGPPMMSTVFYYFTHNEAPFK
FPGAPFVLASILMLLSTIIAYLSFKKRD
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgttaatcgatattacgggttggggaatcattatcccagttatccctaaattgatcaaa
gaattgattcatggtgatattagtgaagcagccaaaattggaggttggttgacatttgct
tatgcgataactcagtttttgtttgcgccattagtaggtaatttgagtgataaatttggg
cgaagacctatcattttgatttcgctgtttgcgttttcattggattatttgttattggct
tttgcgccaacaattgaatggttatttgtaggacgaattattgctggactaacaggagca
agtatttcaacagcaactgcttatattgccgatgtgagcacaccagaaaacagagcgaaa
aactttgggatgataggtgcggcatttggattaggatttattattggacctgttattgga
ggtttgttaggacaatttggcgccagggttccgttttatgctgcagcaggtctttgttta
ttaaactttttgtacggttactttattttacctgaatcattggttaaagaaaatagaaga
gaatttgatatcaaaagagccaatcctattggtgctttattgcatttaaaaaaataccct
aagttaattggtttagtaatagctactttcttattgtatgttgcgtctcacgcagtgcat
agtaattggagtttctttaccatgtatcaattcaattgggacgaaaaaatggtaggaata
tcgttaggtgtaattggactgttagtagggctagttcaaggtggtctgatacgctggatt
aatccaaaattaggaaatgaaaagagtatttatgtaggaatggctttatatactttaggt
atgtttttatttgccactgctaccgaaagctggatgatgtttgtctttttaattccgtat
tgtttgggaggaatcgccggacctgctatgcaagccgtaatttcagaacaagtccctgcc
aatgagcaaggcgaaatccaaggaacaatgtcgagtttaatgagtgcttcggcaattatt
ggacccccaatgatgtctactgttttttattactttactcataacgaagctccatttaaa
tttcctggagcgccatttgttttagcaagtattttgatgttattgagtacaattattgcc
tatttatcttttaaaaagcgcgactaa
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