Rhodobacteraceae bacterium SC52: G5B39_08020
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Entry
G5B39_08020 CDS
T06457
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
faq
Rhodobacteraceae bacterium SC52
Pathway
faq00190
Oxidative phosphorylation
faq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
faq00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
G5B39_08020
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G5B39_08020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
faq03019
]
G5B39_08020
Enzymes [BR:
faq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
G5B39_08020
Messenger RNA biogenesis [BR:
faq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
G5B39_08020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase
PP_kinase_C
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
QIE41907
UniProt:
A0A6G6F6R0
LinkDB
All DBs
Position
complement(1632153..1634387)
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AA seq
744 aa
AA seq
DB search
MPLIPIPLPTDETLPASASDVNFLASSRPKPVSIDGVTPDSPYRFFNRELSWLAFNWRVL
EEAENPAVPLLERLRFVSISANNLDEFYTVRVAGLRELAREGNLTPASDGLTPAQQLVLI
DKDARALMQSQQRAFAALKHELDAAGIHIVGPRKLNRADKKYLEQVFLTQVFPVLSPLAI
DPAHPFPFIPNTGLVQALKLERKSDGKELRALLPIPQQINRFVRLPSKSGEQRFLPLEDV
LLLHIGSLFPGYKLTGDCQFRVLRDSDLEVEEEAEDLVREFETALKRRRRGEVVRLKISG
GAPEDLRAVISRELRVAEDEIIEIRGMIGIVDLKELVLDERPDLLWPSYTPRVPERVQDH
DGDMFSSIAQKDMLLHHPYETFDMVVRFLQQAARDPNVLAIKQTLYRTSYNSPIVAALCE
AAEDGKSVTALVELKARFDEAANIRQSRTLERSGAHVVYGFVNYKTHAKISSVVRREGDK
LVTYSHYGTGNYHPITARIYTDLSFFTCDDSLGRDATKVFNYLSGYAPPKELENLSISPS
DMKADIIRMLEREAEHARAGRPAHVWIKMNALIEPNVIDALYAASNAGVQIMCVIRGICG
LRPGIKGLSENIRVKSIVGRFLEHSRIVCFGNGHGLPSAEARVFFSSADWMGRNLNRRVE
TLVECHNATVKEQIVSQIMAANLCDEAQSWVLDPNGQFRRDKAASETGFNCHQFFMKNPS
LSGRGSAGADDVPRLAKQRSQREG
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgatcccgatccctttaccgaccgatgagacacttccggcctctgccagtgac
gtgaactttctggcgagttcgcgcccgaaacccgtgtccatcgacggagtgacgcccgat
agcccgtatcgcttcttcaaccgagaactgtcttggctggcgtttaattggcgggttctg
gaagaggccgaaaacccggccgtgccgctgctagaaaggctgcggttcgtgtcaatttcg
gccaacaatctggatgaattctataccgtgcgggtcgccggcctgcgcgagttggcgcgc
gaaggaaatcttactccagcttccgatggtctgaccccggcacagcagcttgtgttgatc
gacaaggatgcccgcgcgctgatgcaaagccagcagcgtgccttcgcggcgctcaagcac
gaacttgacgcggccggtatccatatcgtggggccgcgcaagctgaaccgtgcagacaag
aaatacctggaacaggtgttcctgactcaggtttttccagttctctcgccgcttgcaatc
gatccggcgcacccgtttcccttcattccaaatacgggtctggttcaggctctcaagctg
gaacgcaagtcagacggcaaagagcttcgcgcgctgctgccaatcccgcagcagatcaac
cgctttgtccgtctgccgtccaaatctggcgagcagcgattcttgccgctggaagacgtc
ttgctgctgcatatcggcagcctgtttccgggttacaaactgaccggtgactgccagttc
cgcgttctgcgtgacagcgatcttgaggtcgaagaagaggccgaagacctcgtgcgtgaa
ttcgaaaccgcgctgaaacggcgacggcgcggcgaagtcgtccgcctgaagatttccggt
ggcgcaccagaagacctgcgggctgtcatcagccgtgaactgcgcgtggcagaagacgag
atcatcgaaatccgcgggatgatcggcattgttgatctgaaagagttggttttggacgaa
cggccagaccttttatggccgtcctacacaccgcgcgtgccagaacgggttcaggaccat
gacggcgatatgttctcgtcgatcgcacaaaaggacatgttgctacaccacccctatgaa
acgttcgacatggtcgtgcgtttcttgcagcaagccgcccgtgatcccaacgtgctggcg
ataaaacaaacgctgtaccgcacatcttataacagcccgattgttgccgccctgtgcgaa
gctgcggaagacggaaaatcagtgacggcgctcgttgagttgaaagcccgctttgacgag
gccgcgaacattcgtcagtcgcggacgcttgagcgctctggcgcgcatgtggtctatggg
ttcgtgaattacaaaacacacgcaaaaatcagcagcgtggtccgccgtgaaggcgacaaa
ttggtcacgtattcccactatggcaccgggaactatcacccgatcacagcgcggatttat
accgacctgagcttcttcacctgcgatgactctttggggcgcgatgcgaccaaggttttc
aactacttgtctggctatgctccgcccaaggaattggaaaacctctcaatcagtcccagc
gacatgaaggctgacatcatcaggatgttggaacgcgaagccgagcatgcccgtgccggc
cgcccagcccatgtctggatcaagatgaacgccttgatcgaaccaaacgtgatagacgcg
ctttacgccgccagcaatgcgggtgtgcagatcatgtgcgtgatccggggcatttgcggt
ttgcgccccggcatcaaggggctaagcgaaaatatccgggtcaaatccattgtcgggcgg
ttcttagaacattcgcggatcgtgtgcttcgggaacgggcacgggctgccatcggcagaa
gcccgtgtgttcttttcctccgcagattggatgggtcgcaacctgaaccgccgggttgaa
acgctggttgaatgccacaacgccaccgtcaaagagcagattgtaagccagatcatggct
gcgaacttgtgcgacgaagcgcaaagctgggtgcttgacccaaatggccagttccggcgc
gacaaggccgcgtcagaaacgggcttcaattgccaccagttcttcatgaaaaatccgtcg
ctatccgggcgcggatctgctggggccgatgatgtgccacgactggctaaacaacggtct
caacgtgaaggttga
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