Flavivirga abyssicola: Q4Q34_01240
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Entry
Q4Q34_01240 CDS
T09912
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
fay
Flavivirga abyssicola
Brite
KEGG Orthology (KO) [BR:
fay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fay03009
]
Q4Q34_01240 (rimO)
Enzymes [BR:
fay01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Q4Q34_01240 (rimO)
Ribosome biogenesis [BR:
fay03009
]
Prokaryotic type
ribosomal protein modification factors
Q4Q34_01240 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
TMF_TATA_bd
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
WVK13663
LinkDB
All DBs
Position
complement(294069..295373)
Genome browser
AA seq
434 aa
AA seq
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MRTKTLKKNKINVVTLGCSKNVYDSEVLMGQLKASGKDVVHEEEGNIVVINTCGFINNAK
EESVNTILEFMQKKEAGDVDKVFVTGCLSERYKPDLQKEIPNVDEYFGTTELPGLLKALG
ADYKHELIGERLTTTPKNYAYLKIAEGCDRPCSFCAIPIMRGKHRSTPIEEIVVEAEKLA
ANGVKELILIAQDLTYYGLDLYKKRNLAELLEALVKVEGVEWIRLHYAFPTGFPMDVLDV
MNREPKVCNYLDIPLQHISDAILKSMRRGTTKEKTTKLLKEFRAAVPDMTIRTTLIVGYP
GETEEDFQTLKQWVTDMRFERLGCFTYSHEENTHAYNLEDDVPEEVKIERANQIMEIQSQ
ISWELNQEKIGKTFKVVIDRKEGNYFIGRTEYDSPDVDNEVLIDATKTYLKTGEFTTVKI
IEAEDFDLYGEVVV
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacaaaaactcttaagaaaaacaagataaatgttgtaactcttggttgtagtaaa
aatgtttacgacagtgaagtgttaatgggtcagcttaaagctagtggtaaagacgttgtt
catgaagaagaaggaaatattgtagttattaatacatgtgggtttattaataatgcaaaa
gaagaaagtgtgaataccattttagaattcatgcaaaaaaaggaagcgggagatgttgat
aaggtattcgttacaggatgtttaagtgagcgttataaaccagacctacaaaaagaaatt
ccaaatgtggatgagtattttggaacgacagaactgccaggattattaaaagctttagga
gctgattataaacatgaattaataggagaacgtttaacaacaacacctaaaaattatgcc
tatttaaaaattgctgaaggttgcgacagaccctgtagcttttgtgccatcccaattatg
cgaggtaagcatagaagtacacctatagaggagattgttgttgaagctgaaaaattggca
gcaaatggtgttaaagaactcattttaatagctcaggatttaacctattatggtttagat
ttatacaaaaagagaaacttagcggaattattggaggctttagtaaaagttgagggagtt
gaatggattcgtttacattacgcatttccaacaggtttcccgatggatgttttagatgtt
atgaatcgtgagcctaaagtttgtaattatttagacattccattacaacatatttctgat
gctattttaaaaagtatgcgtcgtggtactactaaagagaaaacaaccaagttacttaaa
gaatttagagcagctgttccggatatgaccattagaactacccttattgtagggtatcct
ggagaaacggaagaagattttcaaacattaaaacagtgggttaccgatatgcgttttgag
cgcttgggttgttttacatattctcatgaagaaaacacacatgcgtacaatttagaagat
gatgtgccggaagaagtaaagattgaacgcgctaatcagattatggagatacaatcacag
atttcttgggaactcaatcaagaaaaaatagggaagacttttaaagtggttattgatagg
aaagaaggtaactattttattggacgtaccgagtatgattcaccagatgttgataatgaa
gtgctaattgatgcgactaaaacctatttaaaaacaggagagtttactaccgtaaaaatt
attgaagccgaagactttgatctttatggagaagtagttgtttaa
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