Flavobacteriaceae bacterium AU392: D1817_06230
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Entry
D1817_06230 CDS
T09691
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
fbq
Flavobacteriaceae bacterium AU392
Brite
KEGG Orthology (KO) [BR:
fbq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fbq03009
]
D1817_06230 (rimO)
Enzymes [BR:
fbq01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
D1817_06230 (rimO)
Ribosome biogenesis [BR:
fbq03009
]
Prokaryotic type
ribosomal protein modification factors
D1817_06230 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
TMF_TATA_bd
14-3-3
Motif
Other DBs
NCBI-ProteinID:
AXT19479
UniProt:
A0A3A9ULI9
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All DBs
Position
1371529..1372830
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AA seq
433 aa
AA seq
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MRTKSLKKNKINVVTLGCSKNVYDSEVLMGQLKANNKEVVHEEEGNIVVINTCGFINNAK
EESVNTILEYVKKKEEGDVDKVFVTGCLSERYKPDLQKEIPNVDQYFGTTELPGLLKVLG
ADYKHELIGERLTTTPKNYAYLKIAEGCDRPCSFCAIPLMRGKHKSTPIEELVVEAEKLA
ANGVKELILIAQDLTYYGLDLYKKRNLAELLEALVKVEGIEWIRLHYAFPTGFPMDVLDV
MNREPKICNYLDIPLQHISDSILKSMRRGTTKEKTTKLLKQFRATVPDMTIRTTLIVGYP
GETEEDYQTLKNWVQDMRFERLGCFTYSHEENTHAYNLEDDVPKEVKQERANEIMEIQSQ
ISWELNQQKIGKEFKIVIDRKEGDYFVGRTEFDSPDVDNEVLINASETYLKTGEFAKVKV
TDASDFDLYAEVI
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacaaaatcactaaaaaagaataagattaacgtagtaacactaggttgtagtaaa
aatgtttacgatagtgaagtgttaatgggacagcttaaagcaaataacaaagaagttgta
catgaagaagaaggtaatattgtagtgataaatacttgcggatttattaataatgctaaa
gaagaaagcgttaataccattttagaatacgttaaaaagaaagaagaaggagatgtagat
aaagtgtttgtaacaggatgtttaagcgaacgatataaacctgatttgcaaaaagagatc
ccaaatgttgaccaatactttggaaccacagagttaccaggtttattaaaagttttagga
gcagactataaacacgaacttataggagaacgcttaacaacaactcctaaaaactacgca
tatttaaaaatcgctgaaggttgtgatcgcccatgtagtttttgtgctattccattaatg
cgagggaaacataaatcgacccctattgaagaattagtagttgaagctgaaaaattagcg
gctaatggagtaaaagaattaattctgatagctcaggatttaacctattacggattagat
ctatacaaaaaacgaaaccttgccgaactacttgaagctttagtaaaagttgaaggaatc
gaatggattcgtttacattatgcgtttccgacaggtttcccgatggatgtgttagatgtt
atgaatcgtgaacctaaaatatgtaactatttagatattccgctacagcatatttcagat
tctatattaaaaagtatgcgtcgtggaactacaaaggaaaaaactactaaactgcttaaa
caatttagagctaccgttccagatatgacaattagaacgactttaattgttggttatcca
ggagaaacagaagaagattatcaaacgcttaaaaactgggttcaagatatgcgatttgaa
cgtttagggtgttttacctattctcacgaagaaaatacgcatgcatataatttagaagat
gacgtgccaaaagaagtgaaacaagaacgtgccaacgagattatggaaattcaatctcaa
atctcttgggaacttaatcagcaaaaaatagggaaagagtttaaaatagttatcgaccgt
aaggaaggtgattactttgtagggcgtactgaatttgattcaccagacgtagataatgaa
gttttaataaatgcttcagaaacttaccttaaaacgggggaatttgctaaagttaaagtt
acagatgcatcagattttgatttgtatgcagaagtaatttga
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