Felis catus (domestic cat): 101082303
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Entry
101082303 CDS
T02385
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
fca
Felis catus (domestic cat)
Pathway
fca01524
Platinum drug resistance
fca03430
Mismatch repair
fca05200
Pathways in cancer
fca05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
fca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
101082303 (MSH6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101082303 (MSH6)
09162 Cancer: specific types
05210 Colorectal cancer
101082303 (MSH6)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
101082303 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fca03400
]
101082303 (MSH6)
DNA repair and recombination proteins [BR:
fca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
101082303 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
HORMA
MUM1-like_PWWP
WPP
Motif
Other DBs
NCBI-GeneID:
101082303
NCBI-ProteinID:
XP_003984017
EnsemblRapid:
ENSFCTG00005009864
UniProt:
M3W729
LinkDB
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Position
A3:67181009..67202718
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AA seq
1359 aa
AA seq
DB search
MSRQSTLYSFFPKSPALNNANKASVRASGEGGGAAAATRASASPGGDAAWSEAEAGPLAG
SASPPEARNVNGGLRKSAAPAVPPSSCDFSPGDLVWAKMEGYPWWPCLVYNHPFDGTFIR
EKGKSVRVHVQFFDDSPTRGWVSRRLLKPYTGSKSKEAQKGGHFYSSKPEILRAMQRADE
ALNKDKIERLELAVCDEPSEPEEEEEMEVGATYSSDKSEEDKEIESEEEVPPKVQGSRRS
SRQIKKRRVISDSESDVGGSDVEFKPDAKEEGSSDEISSGVGDSDSEGLDSPVKVASKRK
KMVSGNGALKRKSSRKEMPLATKRSTGISSETKSTLSAFSAPQNSESQAHTGGGCEDSSR
PTFWYHETLEWLKEEKRRDLHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNF
DLVIFYKVGKFYELYHMDALVGVNELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVA
RVEQTETPEMMEARCRKMAHISKYDRVVRREICRVITKGTQTYSVLEGDPSENYSKYLLS
LKEKEEDSSGHTRVYGVCFVDTSLGKFFIGQFPDDRHCSRFRTLVAHYPPVQVLFEKGNL
STETKMILKGSLSSSLQEGLIPGSQFWDAAKTLRTLLEEAYFKEKLNDSGVMLPQVLKGM
TSESDSLGLTPGEKSELALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDRVSATRP
GAVFAKANQRMVLDAVTLSNLEIFLNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLCAPL
CSPYAINDRLDAIEDLMAVPDKISDVADLLKKIPDLERLLSKIHNVGSPLKSQNHPDSRA
IMYEETTYSKKKIIDFLSALEGFKVICKIIETMEEVADNFKSKILKQVITLQTKNPEGRF
PDLTIELNRWDTAFDHEKARRTGLITPKAGFDPDYDQALADIRENEQSLLEYLEKQRSRI
GCRTIVYWGIGRNRYQLEIPENFITRNLPEEYELKSTKKGCKRYWTKTIEKKLANLINAE
ERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLCLANYSRGGDGPMCRPVILFP
EEDTPPFLDLRGSRHPCITKTFFGDDFIPNDILIGCEEEEEESGKAYCVLVTGPNMGGKS
TLMRQAGLLAVMAQTGCYIPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASIL
THATAHSLVLVDELGRGTATFDGTAIANAVVKELAENIKCRTLFSTHYHSLVEDYSQNVA
VRLGHMACMVENECEDPSQETITFLYKFIKGACPKSYGFNAAKLANLPEEIIQKGHRKAR
EFEKMTQSLRLFREVCLASERSTIDAEAVPKLLTLIKEL
NT seq
4080 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacagagcacgctgtacagcttcttccccaagtctccagcgctgaataatgct
aacaaggcctcggtcagggcctcaggtgaaggcggtggtgccgccgctgctacccgggcc
tccgcttctcccggcggggatgcggcctggagcgaggccgaggctgggcccctagcgggc
tctgcgtcgccacccgaggcgaggaacgtcaatggagggctgcggaagtcggccgcgccc
gcggtcccccccagttcttgtgacttctcaccaggtgatttggtttgggccaagatggag
ggttacccctggtggccttgcctggtttataaccacccttttgatggaacattcatccgc
gagaaagggaagtctgtccgagttcatgtacagttttttgatgacagcccaacaaggggc
tgggttagcagaaggctattaaagccatatacaggttcaaaatcaaaagaagcacaaaaa
ggaggtcatttttatagttcaaagcctgaaatactcagagcaatgcaacgtgcagatgaa
gccttgaataaagacaagatcgagaggcttgaattggcagtgtgtgatgagccctcagaa
ccagaggaagaagaagagatggaggtaggtgcaacttactcatcagataagagtgaagaa
gataaggaaattgaaagtgaagaagaagtgccacctaaggtgcaaggatctaggcgaagt
agccgccagataaaaaaacgaagggtcatatcagactctgagagtgatgttggtggctct
gatgtggaattcaagccagatgctaaggaggaaggaagcagtgatgaaataagcagtgga
gtgggggacagtgacagtgaaggcttggacagccctgtcaaagttgcttcaaaacggaag
aaaatggtgtctggaaatggcgctctcaaaaggaaaagttcaaggaaggaaatgcccttg
gccaccaaacgatcaactggcatttcatcagaaaccaagagcactctgagtgctttctct
gcccctcagaattctgaatctcaagcccacactggtggaggatgtgaggatagtagtcgc
cccactttctggtatcatgaaactttagagtggcttaaggaggaaaagagacgagatctc
cacaggaggcgacctgatcaccccgattttgatgcatccacactctatgtgcctgaggat
ttccttaattcctgtactcctgggatgaggaagtggtggcagattaagtctcagaacttt
gatcttgttattttttataaggtggggaagttttatgagttgtaccacatggatgctctt
gttggagtcaatgaactcgggctggtattcatgaaaggcaactgggctcattctggtttc
cctgaaattgcatttggccgatactctgattctctggttcagaagggctataaagtagca
cgagtggaacagactgagaccccggaaatgatggaggcacgatgccggaagatggcacat
atatctaagtatgacagagtggtgaggagggagatctgtagagtcattaccaagggtaca
cagacctacagtgtactggaaggtgacccctctgagaactacagtaagtatcttcttagc
ctcaaagaaaaagaggaggattcctctggccacactcgagtgtatggagtatgctttgtt
gatacctcactgggaaagtttttcataggtcagtttccagatgatcgccactgttctaga
tttaggactctagtggcacactaccctccagtacaagtcttgtttgagaaaggaaatctc
tcaacagaaactaagatgattctgaagggttcattatcctcctctcttcaggaaggtctg
ataccaggctcccagttttgggatgcagccaaaactttgagaactctccttgaagaagca
tattttaaggaaaagttaaatgacagtggggtgatgttaccccaggtgcttaaaggtatg
acctcagagtctgattctcttgggttaacaccaggagagaagagtgaattggccctctct
gctctaggtggttgtgtcttctacctcaaaaaatgccttattgatcaagagcttttatca
atggctaattttgaagaatacattcccttggattctgacagggttagtgctacaagacct
ggtgctgtttttgcaaaagccaatcaacggatggtgctagatgctgtgacattaagcaac
ttggagattttcctgaatggaacaaatggttctactgaagggaccctgctagaaaagatt
gatacttgccatactccctttggtaagcggctcctaaagcagtggctttgtgccccactc
tgtagcccttatgctatcaatgatcgtttagatgctatagaagacctcatggctgtgcct
gacaaaatctctgatgttgcagaccttctaaagaagattccagaccttgagaggctgctg
agtaaaattcataatgttgggtctcccctgaagagccagaaccacccagatagcagggct
ataatgtatgaagaaactacatacagcaaaaaaaagattattgattttctttctgctcta
gaaggattcaaagtaatatgtaaaattatagagactatggaagaagttgctgacaacttt
aagtctaaaatccttaagcaagtcattactttgcagacaaaaaatcctgagggccgtttt
cctgatttgactatagaactgaaccgatgggatacagcctttgaccatgaaaaggctcga
aggactggactaattactcccaaagcaggatttgaccctgattatgaccaagctcttgct
gacataagagaaaatgaacagagcctcctggaatacttggagaaacagcgcagtcgaatt
ggctgtaggaccattgtctactgggggattggcaggaaccgttaccagttggaaattcca
gagaatttcatcactcgtaatttgccagaagaatatgagttgaaatccaccaagaagggc
tgtaaacgatactggaccaaaactattgagaagaagttggctaatctgataaacgctgaa
gagcggagagacgtatcgttgaaagactgcatgcggcgactcttctataactttgataaa
aattacaaggactggcagtctgctgttgagtgcatcgcagtattggatgtcttactgtgc
ctggctaactacagtcgagggggtgatggccctatgtgtcgtccagtaattctgtttcca
gaagaagacacaccccccttcttggaccttagaggatcacgtcatccctgcattacgaag
actttttttggagatgactttattcctaatgacattctaataggctgtgaggaagaggag
gaggaaagtggcaaagcttattgtgtgcttgttactggacctaatatggggggcaagtcg
acactcatgagacaggctggcctgttagctgtaatggcccagacgggttgttacatacct
gctgaagtatgcaggctcacacctattgatagagtatttactagacttggtgcctcagac
agaataatgtcaggtgaaagtacattttttgttgaactgagtgaaactgccagtatcctt
acacacgcaacagcacattctctggtgcttgtggatgaattaggaagaggtactgcaaca
tttgatggaacagcaatagcaaatgcagttgttaaagaacttgctgagaacataaagtgt
cgtacattgttttctacccattaccattcattagtggaagattattctcaaaatgttgca
gtgcgcctgggacacatggcatgcatggtagaaaatgaatgtgaggatcccagccaggag
actattaccttcctatataaattcattaagggagcttgtcctaaaagctatggctttaat
gcagcaaagcttgctaatcttccagaggagattattcaaaagggacatagaaaagcaaga
gaatttgagaagatgacccaatcactgcgattatttcgggaagtttgcctggctagtgaa
aggtcgactatagatgctgaagctgtccctaagttgctgactttgattaaggaattatag
DBGET
integrated database retrieval system