Flavobacterium channae: LOS89_12555
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Entry
LOS89_12555 CDS
T08502
Name
(GenBank) lycopene cyclase
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
fcb
Flavobacterium channae
Pathway
fcb00906
Carotenoid biosynthesis
fcb01100
Metabolic pathways
fcb01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
fcb00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
LOS89_12555
Enzymes [BR:
fcb01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
LOS89_12555
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GFIT
Motif
Pfam:
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
UGS23573
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Position
2699377..2700516
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AA seq
379 aa
AA seq
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MQHYHYIFTGSGLSALMTVYEMLLSGKFEDKSILLIDENTKKANDRTWCFWEEDNLFDEI
VSKKWNQAIFTNEKFNRILELTPYQYKKINGLDFYELVFKKISDHKNIHFLNHTVVDFTE
LGNHCVVKTESVTFTCNKIFNSIYNPEIVKKQNKFPLIQQHFIGWFIKSKEAVFTPNCAT
FMDFSVKQKGNTRFMYVLPTSSTEALLEYTLFSRDLLSKEEYEGEIQKYIENLGITEYEI
IEKEHGNIPMTCYPFWKHNTKNIINIGSAGGWTKASTGYTFKNASKKSKALVQFLKSESD
FTKFHKKDKFWFYDLLLIDILSAKNQLGSKIFSSMFQKGNSTVIFKFLDEETTFSEDLQV
IWKCPKMLFIKALFLRIFK
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgcaacattatcattacatttttacaggttcaggattatcggctttaatgaccgtttat
gaaatgcttttatctggaaagtttgaggataaatccattttgctaattgatgaaaacact
aaaaaagcaaacgatagaacttggtgtttttgggaagaagataatttatttgatgaaatc
gtttcaaaaaaatggaatcaagcgatttttactaatgaaaaattcaatcgaattttagaa
ttaacgccttatcaatacaagaaaattaatggtttagatttttacgaattggttttcaag
aagatttcagatcataaaaacattcattttttaaatcatacagtagttgattttactgaa
ttaggcaatcattgtgttgtaaaaacagaatcagtaactttcacttgtaacaaaatcttc
aattctatttacaatccagaaattgtaaaaaaacaaaacaaattccctttaattcaacaa
catttcattggttggtttatcaaaagtaaagaagcggtttttactccaaattgcgccact
ttcatggatttttcggtgaagcaaaaaggcaatacacgctttatgtatgttttaccaaca
tcttcaactgaagctttgctagaatacaccttgttttcaagagatttactttcaaaagaa
gaatacgaaggtgaaattcaaaaatacattgaaaatcttggtataaccgaatacgaaatc
atcgaaaaagaacacggaaacattccgatgacgtgctatcctttttggaaacacaacacg
aaaaacatcatcaatatcggttcggctggcggctggaccaaagctagtaccggttataca
tttaaaaacgcttcaaaaaaatcaaaagctttggttcaatttctaaaatcagaatccgac
ttcactaaattccataaaaaagacaaattttggttttatgatttgttgctaatagatatt
ttaagtgctaaaaatcagttgggttctaaaatattttcatccatgtttcaaaaaggaaat
tcaactgtcatttttaaatttttagatgaagaaactactttttcggaggatttacaagtg
atttggaaatgtccaaaaatgctttttataaaggcgttatttttaagaatttttaaataa
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