Flavobacterium cyclinae: LOS86_10665
Help
Entry
LOS86_10665 CDS
T08416
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
fcc
Flavobacterium cyclinae
Brite
KEGG Orthology (KO) [BR:
fcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fcc03009
]
LOS86_10665 (rimO)
Enzymes [BR:
fcc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LOS86_10665 (rimO)
Ribosome biogenesis [BR:
fcc03009
]
Prokaryotic type
ribosomal protein modification factors
LOS86_10665 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
TRAM
Motif
Other DBs
NCBI-ProteinID:
UGS20478
LinkDB
All DBs
Position
2291553..2292854
Genome browser
AA seq
433 aa
AA seq
DB search
MRTKSLKKNKINVITLGCSKNTYDSEVLMGQLKANGKDVAHEEEGNIVVINTCGFIDNAK
EESVNTILEYVDKKDQGIVDKVFVTGCLSERYRPDLEKEIPDVDQYFGTTELPLLLKALG
ADYKHELLGERLTTTPKNYAYLKIAEGCDRPCSFCAIPLMRGKHVSQPIEKLVKEAESLA
KKGVKELILIAQDLTYYGLDLYKKRNLAELLENLVKVEGIEWIRLHYAFPSGFPMDVLDV
MKREPKICNYIDIPLQHISDSILKSMKRGTTKEKTTKLLQEFRERVPGMAIRTTLIVGYP
GETQEDFEILRDWVQEMKFERLGCFTYSHEENTGAFALEDDVPHEVKQARAAEIMDLQSQ
ISWDLNQEKIGKVFKCVIDRKEGQYFIGRTEFDSPDVDNEVLVDASKYYLKTGDFVNLKV
TDATEFDLYAEPV
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccaaatcgttaaagaaaaataaaatcaatgtaattacacttggatgttctaaa
aacacttatgatagtgaggtgttgatgggacaacttaaagctaacggaaaagacgtagct
catgaagaagaaggtaatattgtagttattaatacttgtggttttattgataatgcaaag
gaagaatcggtaaatacgattttggaatatgtagataaaaaagatcaaggaattgttgat
aaagtatttgttaccggatgtttatctgaaagataccgtccagatttagaaaaagaaatt
ccagatgttgaccaatattttggaaccacagaattacctttgttattaaaagctttagga
gcagattataagcatgaattattaggtgaacgcttaacaacaactccaaaaaattatgct
tatttaaaaattgctgaaggttgtgatagaccttgcagtttttgcgcgatacctttaatg
cgaggaaaacacgtttcacaacctattgaaaaattggtcaaagaagcagaaagtttagca
aaaaaaggagtaaaagaattaattttaatagcacaagatttaacgtattacggtttagat
ttatacaaaaaacgcaatcttgccgaactattagaaaacttagttaaagtagaaggaatt
gagtggatacgtttgcattatgctttcccaagtggtttcccaatggacgttttagatgta
atgaaacgcgaaccaaaaatttgtaattacattgacattccattacaacacatttcagat
tccattttaaaatcaatgaaacgtggaacaactaaagagaaaacgactaaattattacaa
gaatttagagaacgtgttccaggaatggcaataagaaccactttaattgtagggtatcct
ggagaaactcaagaagattttgaaattcttcgtgattgggttcaagaaatgaaatttgag
cgtttaggctgttttacttattctcatgaagaaaatactggtgcttttgctttagaagac
gatgttcctcacgaagtaaaacaagcaagagcggcagaaatcatggatttacagtctcaa
atttcatgggatttgaatcaggagaaaattggaaaagtttttaaatgtgttatagaccga
aaagaaggacaatatttcattggaagaactgaatttgacagtccagatgtagataatgag
gttttagttgatgcttcaaaatattatttaaaaacaggtgattttgtaaatttaaaagta
acagatgctacagaatttgatttgtatgcagaacccgtttaa
DBGET
integrated database retrieval system