KEGG   Folsomia candida: 110854149
Entry
110854149         CDS       T05043                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9-like
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
fcd  Folsomia candida
Pathway
fcd03020  RNA polymerase
fcd03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:fcd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    110854149
  09124 Replication and repair
   03420 Nucleotide excision repair
    110854149
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fcd03021]
    110854149
   03400 DNA repair and recombination proteins [BR:fcd03400]
    110854149
Transcription machinery [BR:fcd03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     110854149
DNA repair and recombination proteins [BR:fcd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      110854149
SSDB
Motif
Pfam: RNA_POL_M_15KD TFIIS_C Zn_ribbon_recom TF_Zn_Ribbon Ogr_Delta Zn_Tnp_IS1595 DZR zf-C4_Topoisom DUF4892 Lar_restr_allev zf-ISL3
Other DBs
NCBI-GeneID: 110854149
NCBI-ProteinID: XP_021958241
LinkDB
Position
Unknown
AA seq 132 aa
MAQRMSIDQPQSGQGPAFVGIKFCPECNNMLYPREDKENRQLLYACRNCDYKQIADNNCI
YVNKITHEIDELTHIVSDVISDPTLPRTEDHPCPKCQSKEAVFFQAQTRRAEDEMRLYYV
CTNQHCTHRWTE
NT seq 399 nt   +upstreamnt  +downstreamnt
atggcgcaacggatgagcatcgaccagccacaatccggccaaggaccggcttttgtaggg
atcaagttttgtccggaatgcaacaacatgttgtacccgcgagaagataaagagaaccga
cagttactttatgcctgccgaaattgcgactacaagcaaattgcggacaacaattgcatc
tacgtaaacaagattacgcacgaaattgatgaattgacccacatcgtcagcgacgtgatt
tctgaccccactcttccccgaactgaggatcatccttgtcctaaatgtcagagtaaggag
gccgtcttcttccaggcgcagacccgacgggctgaagatgaaatgaggctgtactacgtc
tgcacgaatcaacactgtactcatcgatggaccgagtga

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