Folsomia candida: 110854205
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Entry
110854205 CDS
T05043
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2-like
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
fcd
Folsomia candida
Pathway
fcd03020
RNA polymerase
fcd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fcd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110854205
09124 Replication and repair
03420 Nucleotide excision repair
110854205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fcd03021
]
110854205
03400 DNA repair and recombination proteins [BR:
fcd03400
]
110854205
Enzymes [BR:
fcd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
110854205
Transcription machinery [BR:
fcd03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
110854205
DNA repair and recombination proteins [BR:
fcd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
110854205
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
Slu7
Motif
Other DBs
NCBI-GeneID:
110854205
NCBI-ProteinID:
XP_021958303
LinkDB
All DBs
Position
Unknown
AA seq
1084 aa
AA seq
DB search
MHLIILHKYDFFHIGKLQKRKERLQNAHLLSTDEPPPRRIVTHEEHHLAGEIFINEKVLP
HVGVESNSRIRKALHIGYMVNRLIKTQAGRIECDNRDHIQNKRYDLAGPLMSSLLKKVLH
QRMQGMLLQIIRKIETGRNYDFFEEVGPFYTLTEGFHYAFMTGNWGIKRMPSMRVGVAQV
LCRLNGISTLSYLRRVNSPFNRLGRMTDPRMVHNTAFGYICPVDTPEGEPVGFLKQLSIM
AHVSVDAEISPIRRCLREMNVNQLDEENDHLLATETKIFINASLVNTCPPGAASDLLVEK
LKALRRAWDPDRYQEYLSEFHRMRSERERENKKKGLERSLGVAEVEKEVRKKLNFSSMMS
NQISIVRDFSRREIRIRTDAGRLLRPLYVVKGNLLKLHGHVGILNGNNSVVKFDWPKLLK
AGAVEFLDAAEEENAVIAMHPRNLIPSKDPDSQTSQNTLKLSYTHCEIDPSGTLGVCGAI
IPFANHSHSCRLTFQTNIAKQSLGVYALNYQSRYDVDCHVLYGGQRPLVTCRAAAAFAGF
DANPSGQNAIVAIGSYTGYNQEDSLIMNESAIQRGLFRSMNYKTKDDTAKTNRGFGDENE
TFEKPDHKETGTFRGERTKILDEDGLPYVGEEVRDGDLIFGKVQNIPNREKQEGKEGCSK
RDVSQPIRIPCHSVSYHAGKGEPTKKDPINPSRTMVDNVVVFDNESGYRSCKVRLKTVRC
PQIGDKFASRHGQKGVIGITLPEVDMPFTKDGIVPDIIINPHAIPSRMTIGHLLEMLDGK
VSALAGKISDRPPFSAYDEFENGFGLDLTAQLETELRKRGFQGSGYEVLYCGHTGKKINV
QFFIGPCYYQRLKHMTIDKLRFRARGPISALVRQPNPGISREGGLRFGEMERDSAIAHGG
MQFLRERLFLVSDYYTTPICHTCGQVLTREIVHTVDQVKLREEGAKTYQSTFKCMTCKSQ
KDRGSLVEMPYATKLLFQELMCMSVRVVILPIELEMNDIVQGTISFGHQPRENMVNMISA
DMTQLWNDVQPTGNPVDNDDRASSPAVVPGGRDPNPAVVAVNDSDQELSIPPLEEDITED
FPGL
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgattattcttcataaatacgactttttccacataggaaagttacagaagagg
aaagagaggctacaaaatgctcacttgctctcgaccgacgaacctcccccgcgtcgaatt
gtgacccacgaagagcaccacttggccggtgagatattcatcaacgagaaggttttacca
cacgttggcgtcgaatcaaattcgagaattcgcaaagcactccacatcggttacatggta
aaccgtctcatcaagacgcaggccggccggatagagtgtgacaatcgggatcatatccag
aacaaacggtacgatttagcgggaccattgatgtccagcttgttgaaaaaagtgctgcac
cagcggatgcaaggaatgctgctacagattattcggaaaattgagaccgggcggaattat
gactttttcgaggaagtcggtccattttacacgttgacggaaggatttcattacgctttc
atgaccggaaattggggcattaaacggatgccttccatgcgtgtgggcgtagcgcaggtg
ctatgtcgactcaacgggatttcgacgctcagttacttacgtcgggtcaactcaccattc
aaccgacttggcaggatgactgatcctaggatggtgcacaacacggcttttggctacatt
tgtcccgtcgatacccctgaaggtgaacctgtcggatttcttaagcagttatccatcatg
gcgcatgtctccgtggatgcggagatttctcccattcgacgatgcttgagggagatgaat
gtcaatcagcttgatgaagaaaatgatcacttattagcgacggagacgaaaatcttcatc
aacgcctccctcgtaaacacctgtccccctggcgccgcgtcagacttgctcgtcgagaaa
ctcaaagccctcagaagagcttgggatcctgaccggtaccaggagtacttatcagaattc
cacaggatgcgctcagaacgcgaacgggaaaacaaaaagaagggtttagaacgatccctt
ggcgtggctgaagtggaaaaagaagtccgaaagaaattgaacttttcatccatgatgagc
aatcaaatttcaatcgttcgagatttctcgcgacgtgaaattcgaatcaggacggatgca
gggagattattgcgcccattgtacgtcgttaaagggaacctgctcaagttgcatggacac
gtcggaatactgaacggaaataattccgttgtcaaattcgactggcctaaacttctcaaa
gctggagcagttgaatttcttgacgccgccgaagaagaaaatgcagttattgcgatgcat
cccagaaatctgataccctccaaggatccagactcccagacgtctcaaaatactctaaag
ttatcgtacactcactgcgaaattgatccgagtggtacactcggcgtttgtggggctatt
attccattcgccaatcatagtcatagctgtcgactaacatttcaaacaaacattgcaaaa
caatctcttggcgtctacgcgctcaactatcagtccagatatgacgtggactgtcacgtc
ctttacggaggacaacggcctctcgtcacctgcagagcagccgcagcctttgccggattt
gatgccaatccttcgggtcaaaatgctatcgtggcgattggttcgtacaccgggtacaat
caggaggacagcctgattatgaatgagagtgccattcagagaggactctttcgctcgatg
aactacaaaactaaggacgacacggcaaaaacaaatcgaggatttggcgacgagaatgaa
acgtttgaaaagcctgaccataaagaaaccggaacttttcgaggggaacgaactaaaatt
ttggatgaggatggcttaccatatgtcggagaggaagtcagagacggagacttgatcttt
ggaaaagtacaaaacatacccaatcgtgaaaaacaagaaggcaaagaaggctgcagcaaa
agggatgtttctcaacccattcggatcccttgtcactcagtttcttaccatgctggcaaa
ggcgaacccactaagaaagaccccatcaacccgtcacgaaccatggtcgacaatgttgtc
gtgtttgacaacgagagtggataccgatcatgtaaagttcgcctcaaaacggttcgatgt
cctcaaattggggataaatttgcgtcaagacatggtcaaaaaggagtgattggtatcacg
ttacccgaagttgacatgcctttcaccaaggatggaattgtgcccgacataataatcaat
ccgcatgcaattccttctcgaatgacgattggtcatttactggaaatgttggatggaaaa
gtttctgcattggcaggcaaaatatcggatcgacctccgttcagtgcttacgatgaattt
gagaacggatttggattggatttgaccgcacagcttgaaacggagctgaggaaacgagga
ttccaagggtcaggatatgaagtcttgtactgtggacatacaggaaagaagattaacgtg
caattttttattggtccgtgttactaccagcgtcttaaacacatgaccattgataaatta
cggttcagagctagaggccccatttcggcgttagtgagacagccaaaccctggaatttct
cgagaaggtggcttacgtttcggggaaatggaacgcgactcagccatagctcacggtgga
atgcaatttcttcgggaacgacttttcctcgtatccgattactacacgacgccaatctgt
cacacttgtggtcaagtcttgacgcgtgaaatagttcataccgtagatcaggtcaagttg
cgggaggaaggagcaaaaacatatcaatctacttttaagtgtatgacttgcaaatctcag
aaggacaggggcagccttgtcgaaatgccgtacgctacaaagttattgttccaagaacta
atgtgcatgagcgtaagggttgtgattcttccgatcgagttggaaatgaatgacattgta
caaggaaccatatcctttggtcatcaaccgcgcgaaaacatggtgaacatgatttccgcc
gatatgactcaactttggaatgacgtgcaacccaccggaaatcccgtcgataatgatgac
cgtgcctccagtcctgctgtcgtccctggtggccgtgaccccaatcctgctgtcgtcgca
gttaatgactctgaccaagagctgagtattccacctctagaagaagatatcaccgaagat
tttcctgggttgtag
DBGET
integrated database retrieval system
