Flavobacterium collinsii: TRV642_4159
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Entry
TRV642_4159 CDS
T08703
Symbol
rsmD
Name
(GenBank) Ribosomal RNA small subunit methyltransferase D
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
fcs
Flavobacterium collinsii
Brite
KEGG Orthology (KO) [BR:
fcs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fcs03009
]
TRV642_4159 (rsmD)
Enzymes [BR:
fcs01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
TRV642_4159 (rsmD)
Ribosome biogenesis [BR:
fcs03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
TRV642_4159 (rsmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cons_hypoth95
MTS
Methyltransf_31
MethyltransfD12
Methyltransf_25
Methyltransf_15
BpsA_C
N6-adenineMlase
Spermine_synth
UPF0020
DNA_methylase
DUF938
Motif
Other DBs
NCBI-ProteinID:
CAI2768849
UniProt:
A0A9W4TIS6
LinkDB
All DBs
Position
TRV642:4770410..4771015
Genome browser
AA seq
201 aa
AA seq
DB search
MRIISGKYKGRRIFPPKNLPVRPTTDMSKEALFNVLNNHFSFDGLKVLDLFSGTGNISFE
FASRGSAPITSVDGDFGCVKFIKQVSSEYDFDIAATKSDVYKFLDNCKTSYDIVFADPPY
GLDQTAFEKIVVTVFEKELLHEDGMMIIEHSKYTKMDHLSNFSFQKSYGGSFFSFFELNS
TDDDEELPDDLSTKITEEDEG
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgagaatcatttcaggaaaatacaaaggtcgccgcatctttccgccaaaaaaccttcct
gtaagaccgacaaccgacatgagcaaagaagcattgtttaatgttttgaacaaccatttt
agttttgacggtttaaaggtactggatttgttttcaggaaccggcaacatcagttttgaa
ttcgcttcacgcggaagcgctccaattacctctgtagatggtgattttggatgtgtaaaa
tttatcaagcaggtttcatcagaatacgattttgatatcgctgcaactaaaagtgatgtt
tacaagtttctggacaactgtaaaacttcttacgatattgtttttgccgatccgccttac
ggattagatcagactgcatttgaaaaaattgtcgtaacggttttcgaaaaagaactcctt
catgaagacggtatgatgattatcgagcattcaaaatatacaaaaatggatcatttgagt
aatttttcttttcaaaaaagctacggaggatctttctttagttttttcgaattgaactca
accgatgacgacgaagaattaccggacgatttgtcaaccaaaataacagaagaagacgag
ggataa
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