Fundicoccus culcitae: NRE15_09720
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Entry
NRE15_09720 CDS
T09401
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
fct
Fundicoccus culcitae
Pathway
fct03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fct00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NRE15_09720 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fct03021
]
NRE15_09720 (rpoE)
03400 DNA repair and recombination proteins [BR:
fct03400
]
NRE15_09720 (rpoE)
Transcription machinery [BR:
fct03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NRE15_09720 (rpoE)
DNA repair and recombination proteins [BR:
fct03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NRE15_09720 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
UUX33177
LinkDB
All DBs
Position
2140341..2141021
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AA seq
226 aa
AA seq
DB search
MALDELDGQIKSELSLIEVAYAIIVDHGDIIEFNDLLVQVQEYLGLTETQLESKMARFYT
DLNVDGRFISLGENRWGLRIWYPIDSIDEEIITSSEEEDHPKRARKRRKLNVFADDDMID
YNDDDPEDSDLPYDDEDDDYDLSAEDEDEMDEEEAEDLDMILAEEDKDDDDEELGAYASD
LSELGDDEVDIPEDDFEEFDDVDEVEEEEEEEEEVEDDEVFDFDEE
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atggcactagatgaactagacggtcaaattaaaagcgaattgtcgctcattgaagtcgca
tatgctataattgtggatcatggcgatattattgaattcaacgatttattagttcaagta
caagaatatttaggtttaactgagacacaacttgaaagcaaaatggcgcgtttttataca
gatttaaatgtggatggacgctttatttctttaggcgaaaaccgttggggcttgcgcatt
tggtacccaattgattcaatcgatgaagaaattattacctcatcagaagaagaagatcat
ccaaaacgtgcccgtaagagacgtaaactgaatgtctttgcggatgatgatatgattgac
tacaacgatgatgatcctgaagatagtgatttaccttacgatgatgaagatgatgattac
gatttatcggcggaagatgaagacgaaatggatgaagaagaagccgaagacctcgatatg
attttagccgaagaagataaagacgatgacgatgaggaactaggtgcctatgcctcggac
ttatcagaattaggtgacgatgaagtggatattcctgaagacgactttgaagaattcgat
gatgtggatgaagtcgaagaagaggaagaagaggaagaagaagttgaagacgacgaagta
ttcgactttgatgaagaataa
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