Fragilariopsis cylindrus: FRACYDRAFT_180941
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Entry
FRACYDRAFT_180941 CDS
T04784
Name
(GenBank) phosphatase 2A regulatory A subunit
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
FRACYDRAFT_180941
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
fcy01009
]
FRACYDRAFT_180941
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fcy03019
]
FRACYDRAFT_180941
03036 Chromosome and associated proteins [BR:
fcy03036
]
FRACYDRAFT_180941
Protein phosphatases and associated proteins [BR:
fcy01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
FRACYDRAFT_180941
Messenger RNA biogenesis [BR:
fcy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
FRACYDRAFT_180941
Chromosome and associated proteins [BR:
fcy03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
FRACYDRAFT_180941
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT
HEAT_2
PPP2R1A-like_HEAT
Vac14_Fab1_bd
Cnd1
HEAT_EZ
PDS5
IFRD
Adaptin_N
DUF5021
Motif
Other DBs
NCBI-ProteinID:
OEU21310
JGI:
180941
UniProt:
A0A1E7FT07
LinkDB
All DBs
Position
Unknown
AA seq
610 aa
AA seq
DB search
MFRGDDVSARVAAANRLEAVATVLGEQRTREELLPFLTDGVDDEDEVLLALANSLGKMIP
SVGGGSYAQSLLPPIELLLMVEENTVRDAATASASLIASALPDEIFQDKYASMLTRLARK
EWFTARISSAGLIANAYPRLTQTQQEEHLKLFAELCQDDTPMVRRVAAQNLGIMVENVVQ
VAGRCSLEEGGVVTTILIPLYETLSSNEQPDSVRLQTTENCVVFGRVMGNLTLIQRLLPL
IVATIDDRSWRVRWTAAAKFADVINAYNPIPGAMDALIPAYEKLLQDPEAEVRTAATFNL
AKVAQGCESMILPMTAVGAEGDDDVSAAANFTGERVAAAERLVKRVTLMTEDDSEHVRAA
LAMVATELAPILGRDATITHLVPPILLLLRDAASEVRLNLISSLESLNKVIGVDLLSQSL
LPAILDLAQDGKWRIRLAIIQQTPLLAEQLGKDFFTDKLSSICVNWLGDDIATIRDAATR
NIKELTALFGTDWACDHLLPSIDEIRQNSSYLRRLTAVQACGRMAVEMDPAIAQTEVLPL
ILEMATDTVANIRFNVAQALGEMGTICDPNVYDQQIHPVLMLLHDDPDRDVRFFADKTSL
RLEEAFAQKR
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgaggagatgatgtttcagctcgtgtagcagctgccaatcgattagaggctgtg
gcgacggttttgggtgaacaacggacaagagaggaactgttaccattcttgacagatggg
gtcgatgacgaagacgaagttttgttagctctagcaaattctctcgggaaaatgattcct
tctgttggtggtggtagttacgcccaatcacttttgccacccatagaattacttttgatg
gttgaagaaaataccgtccgagacgccgccacggcgagtgcatcactgatagcatcagct
ttacccgatgaaatttttcaagacaaatatgcatccatgttgacacgactagctcgtaag
gagtggtttacggcacgaatttcctcagcaggtctcatagctaatgcatatcctcgacta
acacagactcaacaagaagaacatttgaaattatttgcagaattatgtcaagacgataca
cccatggtaagaagagtggcggcacaaaaccttggaataatggtagaaaatgttgttcag
gtggcgggacggtgtagcttagaagaaggaggagtggtaacgacaattttaatcccactg
tacgaaacactttcatcgaatgaacagccagactccgttagactgcaaacgacagaaaac
tgtgtcgtattcggtcgtgtaatggggaatttaactttgattcagcgtctattaccttta
attgtagctacaatagatgatcgatcatggagggttagatggacagccgcagccaaattt
gccgatgttatcaatgcatacaatccaataccgggagccatggatgcattaattcctgct
tatgaaaaattgcttcaagatccagaagctgaagtacgaactgctgcaacctttaacttg
gcaaaagtcgctcaggggtgcgaatctatgattctaccgatgacggcagttggagctgaa
ggggacgacgatgtatcagctgctgctaattttactggagaacgagtagcggccgctgaa
cgattagtcaaacgagtcactctcatgactgaagatgacagcgagcatgtacgagctgct
ctagccatggttgctaccgaacttgcaccgattctaggaagggatgcgaccatcacacat
ttagttccaccaatcttgcttctattacgggatgcagcctccgaagtacgtcttaatctg
atatcttccctggaaagcctcaataaggttatcggagtcgatctgctatcacaatcactg
ttaccggctattcttgacttggcacaagatgggaaatggagaatccggttggctataatt
cagcaaactcctttactggcggagcaattaggaaaagacttttttactgataaactatct
tccatatgtgtcaactggttgggggatgatattgcgactattcgagatgctgctacgagg
aatatcaaggaattgaccgctctctttgggacagattgggcatgtgatcatttactccca
tctattgacgaaatccgtcaaaactcgtcatatctgagacgtttaacagctgtccaagcc
tgtggtaggatggctgttgaaatggatcctgcgattgcacaaactgaagtactgccactc
atattagagatggcaactgacactgtggccaacatacgattcaatgtcgctcaggctttg
ggagagatgggcaccatatgtgaccccaatgtgtacgatcaacagatacatcccgtattg
atgttattgcacgatgatcctgatagagatgttcgtttcttcgcagataagacttctttg
aggctggaagaagcattcgcgcaaaaacgatag
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integrated database retrieval system
