Fragilariopsis cylindrus: FRACYDRAFT_188281
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Entry
FRACYDRAFT_188281 CDS
T04784
Name
(GenBank) P-loop containing nucleoside triphosphate hydrolase protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FRACYDRAFT_188281
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fcy02000
]
FRACYDRAFT_188281
04147 Exosome [BR:
fcy04147
]
FRACYDRAFT_188281
04090 CD molecules [BR:
fcy04090
]
FRACYDRAFT_188281
Enzymes [BR:
fcy01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
FRACYDRAFT_188281
Transporters [BR:
fcy02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
FRACYDRAFT_188281
Exosome [BR:
fcy04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
FRACYDRAFT_188281
CD molecules [BR:
fcy04090
]
Proteins
FRACYDRAFT_188281
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_22
SMC_N
AAA_29
AAA_21
AAA_16
AAA_18
RsgA_GTPase
AAA_5
AAA_25
DEAD
AAA_33
ABC_ATPase
NST1
Motif
Other DBs
NCBI-ProteinID:
OEU14210
JGI:
188281
UniProt:
A0A1E7F7R9
LinkDB
All DBs
Position
Unknown
AA seq
1368 aa
AA seq
DB search
MSSNDGGIGVGLNSQLSTKELLPNTNNHDNDNGNGKKKKRKKSKKNRRPANNSGEHSSDA
GFYQAGLAGAGSISAADVLIKSVQQKVNHLAATDLALSTSVDDDPPAVVAAATATEPSKI
GFLSMFYFSTFNEKIWMIVGLFWAAIAGLAMPAWLLLLSTSLETFNDIGSIVAAGGDISI
LQKEMQKLIYSFAIVGFVTLISGTCYVAIWSYTGEAQTLRIRKAFVKSALRQEAAWFDTR
PGGGDPQELPVLAANGLSRIQTSIGRAVADTFSNLLSAIGCLMVSLGLDPPLALFMLCVL
PLIAIVIGIVSCYMRRSSGKALAEFASAGAFASEVLTGIKTIASLRAENWAVQHYTEYAI
EAQKYSIRSQILSKLASGLMGLFFYITYTFAFVFGTEQAASRVEVEQSYISPFACMFRET
DCGISGSEVMVCIYGVILTAQFIALMNPGLNSINLGRTAAVDIYGTIHRTPAIDGTGNVK
GTKLLGSSKKSPYDGSMEFKNVVFSYPSRPGDLVLANFSLKIKAGTAVALVGPSGSGKST
LSKLLLRLYDPIGGHVMAGGVPLTELNLKWWRSQIGYVAQEPSLFPGSIRDNIAAGKLDG
IASNEEVTKAAMAASAHEFITDLPDGYDTFYSGSSIQLSGERLVQEALDKIRGQRKLTTV
TVAHRLSTIVNSDQIAVIADGSIQELGTHEKLIKEGGIYALLCEGQGLTADAASNNNTTT
KLSDSTPAATPAFGRSMIKGRSMIKAGNEDDVEAGIITIDEDNDDDDDDGVPDTSSVLSR
LWQYNKAETGYTIMGYSGGIIVGALPACEAILFGIITGNFYLIEDPQEMRTTNFSLSLWF
LLLAAASFVANIAMGVGFGISGFRLTRRMRVLVFQKIMQHNMGWFDFPEHSTGELTTHLE
EDCEAVSNVTGWQQGQRVQVLSTLISGMVIALVYSWQIGLIAICCIPFILGASILQAKCA
SRQPKHRREINSVSAATLLERAFHDIVVLQAYGLQDDASMKYSKSLEPDSEFKKKQGFYN
GLAFGISQFAVFSTFAIIFSVGIQLMINLQIGFIDFFVALLAVMFSALGAGQTGADFSSR
QAGLEAGARLFEIVDGSADEDDPLSMKGSKPSSLIGKVEFKACHFAYPTRPNAPIYYERD
GRDGFTLDIPSQKSVAFTGRSGCGKSTALQLLLRFYRVGSGSVLLDDQNISDVNVGWLRN
EIGYVGQMPVLFAGTVRDNIKLGKPNATQQEIIDAAKAANAHDFVSNLSSGYDTDIGTGG
SLLSGGQKQRIAIARAIVKDPKILVLDEATSALDNESEKIVQAALDAMQEKKPRTTLVVA
HRLETVKKCDKIVVLDRGGVKEQGSHAELLQQKGLYHTLWSKQGGIEK
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcaacgacggtggtattggtgttggtttgaatagtcaactctccacgaaggag
ttgttgccgaatacgaataatcatgacaatgacaatggcaatggcaagaagaaaaaaaga
aaaaagagcaagaagaatcgacgacctgcaaacaatagcggcgaacacagtagtgatgca
ggattttatcaagcaggtttagctggtgcaggatcaatatcagctgcagatgttttaatt
aagtcggttcaacaaaaagtaaatcatcttgctgcgacagaccttgcattatctacgagc
gttgatgatgatcctcctgctgttgtggctgctgctactgctacagaaccaagtaaaatt
ggttttctatcaatgttttatttttctacattcaatgaaaaaatatggatgatagttgga
ttattttgggcagcaattgctggtttagcaatgccagcgtggttactcctgttaagtaca
tcattagaaacattcaatgatattggttcaatagttgctgccggtggggatattagtata
ttacagaaagaaatgcaaaaattaatatatagttttgctattgttggttttgttacattg
attagtggtacatgttatgtagcaatctggtcctatactggtgaggcacaaacattacgg
atccgaaaagcattcgttaaaagtgcattacgacaagaagcagcatggtttgatacacga
cccggtggcggcgatccacaagaattacctgtattggcagctaatggtctatcgagaatc
caaacatcgatcggtagggctgtggctgatacattttctaatctactaagtgcgatcggg
tgcttgatggtttcgttgggattagatccaccattagcattatttatgctatgcgtatta
ccactaattgctatcgttattggtattgttagttgttatatgcgacgaagtagtggtaaa
gcacttgctgaatttgcatccgctggtgcattcgcatcagaagttctaacaggaattaaa
acaattgcatcattacgagctgaaaattgggccgtacaacactatacagaatatgcaatt
gaggcacaaaaatattcaatacggtctcaaatattatctaaattagcatcaggattaatg
ggattattcttttatataacatatacatttgcatttgtctttggtacagaacaggcagca
tcacgtgtagaagttgaacaaagttatataagtccattcgcatgtatgttccgtgaaact
gattgtggtattagtggtagtgaggttatggtatgtatatatggtgttatattaacagca
caatttattgcattaatgaatcctggtttaaattcaattaatttaggtcgtacagctgct
gtggatatatatggtactattcatcgtacacctgccattgatggtacaggtaatgtaaaa
ggaacaaaattactaggtagtagtaaaaagagtccttacgatggtagtatggaattcaaa
aatgttgtattctcatatccatcccgaccaggtgatttggtgcttgcgaatttctcatta
aagattaaagctgggacagctgttgcattagtaggtccgtctgggagtggtaaaagtaca
ctcagtaaacttttgttgcgtctatatgatccaattggtggacatgttatggcaggtggt
gtaccattaactgaattgaatttaaaatggtggcgaagtcaaatcgggtatgttgcacaa
gaaccatcattatttcctggatcgattcgagataatatcgctgctggtaaattggatgga
attgcttcgaatgaagaagttactaaggcagcgatggcagcaagtgcgcatgaatttatt
acagatttaccggacgggtatgataccttctattctggttcatcaattcaattgagtgga
gaacgattggtccaggaggcgctcgataaaatcaggggacaacgcaaacttacaactgta
accgtggctcatcgactatcaacgattgtaaattcggatcagattgctgtgattgcagat
ggctcgattcaagaattgggtacacacgagaagttgatcaaagaaggtgggatatatgcg
ttgttatgtgaaggtcaaggcttgacagcagatgctgcttcaaataataatacaactacg
aagttgtcagacagcacgcccgcagcaacacccgcatttggacggtcgatgatcaaagga
cgatcgatgatcaaggccggcaatgaggatgacgttgaggcaggaattattaccatcgat
gaggataatgacgacgacgacgatgatggagtgcctgatacttccagtgtcctttctcga
ttatggcaatacaataaggcagaaacaggatatacaataatgggatatagcggaggaatt
atagtaggcgctttaccagcttgcgaagcaatcctttttggaattatcacgggaaatttt
tatcttattgaagatccacaggaaatgcgtacaacgaacttctccttatcactttggttc
ttattattggcagctgctagttttgtagcaaatatcgcgatgggagttggctttggtatc
tcgggctttcgtttaacaagaagaatgcgtgttttggtctttcaaaagattatgcaacac
aatatgggatggtttgactttccagaacacagtacaggagagctaacaacacacttggag
gaagactgcgaagccgttagcaacgttacgggttggcaacaaggtcaacgagttcaagta
ctttcaaccctaatttctggtatggtaattgcacttgtgtattcctggcagattggcttg
atcgctatctgttgtattccttttatcctcggtgcaagtatattgcaagcaaaatgtgca
tcccgtcaaccaaagcatcgtcgagagataaattctgtatctgccgctactctgcttgaa
agagcattccacgacatagttgttttgcaagcatatggtttacaagatgatgcctcgatg
aaatattcgaagtcattagagcctgattctgaatttaaaaagaagcagggattctacaat
ggacttgcttttggaatctctcagtttgcggtattctcgacgtttgccattatattttcg
gttgggatacagcttatgatcaatctgcaaataggcttcatagatttttttgtcgcattg
ttggctgtcatgttctcagcgcttggagctggtcagactggtgcagacttttcctcgcgg
caggctggtttggaagctggcgcacgcctttttgaaatcgtagacggatcagctgacgaa
gatgaccctctctcgatgaagggaagtaagccaagtagtctgattggtaaagttgaattc
aaggcatgtcacttcgcatatcctacacgaccgaatgctcctatctattacgaacgagat
gggagagatggctttacgcttgacattccttctcaaaaatccgtagcatttacaggtaga
agcggatgtggcaagagtacagcattgcaattgctattgcgtttctatcgtgttggatca
ggatccgtcttgttggatgatcaaaatatttcggatgtgaatgttggttggttacggaat
gaaattgggtatgtgggacagatgccggtgctattcgctggtactgttcgagataatatc
aaattaggtaaaccaaatgcaacccaacaagaaatcatcgatgctgcaaaggctgcaaat
gcacatgattttgtgtctaacttaagttctggctacgatacagatattggtacaggtgga
tctttgttgtcggggggccaaaaacaaagaattgccattgctagagcgatcgtgaaagat
cctaagatattagtgttggatgaagctacgtcggcactggataatgaaagtgaaaagatt
gtacaggcagcacttgatgctatgcaggaaaagaaaccccgtactacacttgttgttgca
cacagattagaaacagtgaaaaaatgtgataagattgttgtgttagatcgtggtggagtc
aaggaacaaggatcacacgctgaactgctgcaacaaaagggtctatatcatacactctgg
tccaagcaaggtggtatagagaaatag
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