Fragilariopsis cylindrus: FRACYDRAFT_190208
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Entry
FRACYDRAFT_190208 CDS
T04784
Symbol
LCYB1
Name
(GenBank) lycopene beta cyclase
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy01100
Metabolic pathways
fcy01110
Biosynthesis of secondary metabolites
Brite
Enzymes [BR:
fcy01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
FRACYDRAFT_190208 (LCYB1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Lycopene_cycl
Thi4
FAD_binding_3
Pyr_redox_2
NAD_binding_8
DAO
Shikimate_DH
FAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
OEU13190
JGI:
190208
UniProt:
A0A1E7F4V7
LinkDB
All DBs
Position
Unknown
AA seq
607 aa
AA seq
DB search
MRILVIITCTFTSLFCCFSHAFLATSPPLGPISSTSTSSTRYYPFRSKNFPAIGASSLKS
SSNAADSNNNIDDSCDVLILGGGPAGCAIASLLGSNGKLDVVVANKDFDKDWVPNYGVWK
DEWQTVLDKYKSFGIELDGGEFGRSVDREWDVTDCYFGGSFDIPTEKRMRLDRPYCRIDR
FALKKSLTKNFRVVEANHMSNAIGINMYRPAGTLIHDEDGTTIQLQPKDADSSPVTMRTK
IVIDTTGHETKLVMKDNIEPYTQPGFQIAYGASVVVDETESTNLSKIGPYEKDAMTLFDY
RTDHFDGNESETIKANKAPTFMYAMPLGGNRVFFEETSLVARPAVSFQECKDRCFKRLKH
HGIVVTKIEEEEFCYIPMGGALPARDQRILGLGGAATMVHPSTGYHICRCLMGASSVAKV
IQEELALEQPNIDRAVASSYDALWSPGNIRQRNFATFGGEFLMKQNVVGLRGFFDGFFKL
PLELWGGFLAGWPGLAYNENHESWEKRIWFGLNFIVKLPLPVAADMFLSIVSYSLTENFS
LIQSVTPLLGDPPSYKYKRNMDSIGDVAAKEEAVGMIRRSNADVAEMPTEVAITAEKTKD
VAVVEST
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgagaatccttgtcatcatcacttgcacatttactagcctgttctgttgtttcagccat
gctttcctcgcgacatcgcccccactaggaccgatctctagcacttccacttccagcacg
cgttattatcctttccgtagtaagaatttccccgctatcggtgcatcatcattaaaaagt
agttctaatgctgctgatagtaataataatattgatgattcttgtgatgtgcttatatta
ggtggtggtccagctggatgcgcaatcgcatcacttttgggttcgaatggaaaattggat
gtagttgttgccaataaagattttgataaagattgggttccgaattatggtgtatggaaa
gatgaatggcaaacagtattagataaatacaaatcattcggaatagaattagatggtgga
gagtttggccggtccgttgatagagaatgggacgtcacggattgttactttggtggatct
tttgatataccgactgaaaaacgtatgagacttgatcgaccgtattgtcgtattgaccgg
tttgcattaaagaaatcattgacgaagaactttcgtgttgttgaggctaatcatatgtcc
aatgctattggcattaatatgtatcgtcctgctggaaccttgatccatgatgaggatgga
actactatacagttacaaccaaaagatgcagattcatccccagtaacaatgagaacaaag
attgttattgacacaactggtcatgagactaagttggttatgaaagataatatagaacca
tatacacaacctggatttcaaattgcatatggtgcatcggttgtagttgatgaaacagaa
tcgacaaacctatcaaagatcggaccgtacgaaaaagacgctatgacattatttgattat
agaacagatcattttgacgggaatgaatcagaaacaataaaagcaaacaaggcacctaca
tttatgtatgcgatgcctcttggaggaaatagagtattttttgaagagacatcgctggta
gctcgaccggctgtatcttttcaagaatgtaaggaccgatgtttcaaacgattgaaacat
catggcattgtcgttacgaagattgaagaagaggaattctgttatataccgatgggtggt
gccctcccagctagagaccaacggattctaggactgggtggtgcagcaacaatggtccat
ccaagtacggggtatcatatctgtcgttgtctcatgggtgctagttcggttgcgaaggtc
attcaagaagaacttgctttggaacaaccaaacatcgatcgagctgtcgcatcgtcctac
gatgcattatggtcacctggaaacataagacaacggaattttgccacattcggtggtgaa
ttccttatgaaacaaaatgttgtaggtcttcgaggtttctttgatgggttctttaaactt
ccattagagctttggggtgggtttcttgccggatggcctggtcttgcctacaacgagaat
cacgaatcatgggagaaacggatatggttcggtctcaattttattgtaaaactaccactc
ccagttgctgcagatatgtttctcagtatcgtttcttactctcttactgagaacttctcg
ctaattcaatctgtaactcctttgcttggtgatccaccttcctacaaatataagcgaaat
atggattccataggggatgttgctgcaaaagaagaagctgttggcatgattcgtcgatca
aatgccgacgtagctgaaatgcctaccgaagttgccattaccgcagagaagactaaagat
gtagcagtagtcgaaagtacctaa
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