Fragilariopsis cylindrus: FRACYDRAFT_191008
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Entry
FRACYDRAFT_191008 CDS
T04784
Symbol
RMLC1
Name
(GenBank) putative bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase
KO
K12451
3,5-epimerase/4-reductase [EC:5.1.3.- 1.1.1.-]
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy00520
Amino sugar and nucleotide sugar metabolism
fcy01100
Metabolic pathways
fcy01110
Biosynthesis of secondary metabolites
fcy01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
FRACYDRAFT_191008 (RMLC1)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FRACYDRAFT_191008 (RMLC1)
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GFIT
Motif
Pfam:
RmlD_sub_bind
Epimerase
Polysacc_synt_2
GDP_Man_Dehyd
3Beta_HSD
NAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
OEU12937
JGI:
191008
UniProt:
A0A1E7F469
LinkDB
All DBs
Position
Unknown
AA seq
319 aa
AA seq
DB search
MSEEAKSTEMKRVLVFGGKTGWIGNLMCELMEGEEKGVEVFRANSRIQNREAVAAELDEI
KPTHVFNAAGITGRPNIDWCETHKPETIRTNVIGTLNLADLCLDRNIHCTVYATGCIFAY
DEKHPEGSGIGFSEEDTPNFDGSFYSQTKGYMEPMLKEYSNCLILRVRMPISDDLIHRSF
VTKILKYERVVNIPNSMTILTEMLPASLAMAKKGLTGVYNFTNPGVISHNEVLDLYTKII
DPTYTYNNFTLEEQSKILAAARSNNELDTTKLLRDMPDGIEINEIKKAYELCFERMKINL
EKEHGGPVPDCLPKEFRRI
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagaagcaaagtctaccgagatgaaacgcgtcctcgttttcggagggaaaaca
ggatggattggcaatctgatgtgtgaacttatggaaggtgaagaaaagggagttgaagtt
ttccgtgccaattctcgtatccaaaaccgtgaagcagtcgcagccgaattagatgaaatc
aaaccaactcacgtatttaatgctgcgggtattaccggacgtcctaacatcgattggtgc
gagacacataaaccagaaacgatccgtaccaatgtcatcgggacactcaaccttgccgat
ctttgccttgaccgtaacatacattgtacggtatacgcaactggttgcatcttcgcttat
gatgaaaaacatccagaagggtccggtattggtttcagcgaagaagatacgccaaacttt
gatggatccttttacagtcaaactaagggatacatggaacctatgttgaaggaatattct
aattgtttaattttgcgtgttcggatgccaatttctgatgatcttatccatcgtagtttc
gttactaaaatcctcaagtacgagcgtgttgtgaatattcctaattctatgacaatctta
acggaaatgctcccagcatcattagcgatggccaagaagggtttgaccggtgtgtacaac
tttaccaatcctggtgttatctcacacaatgaggtgttagatttgtacacgaagatcatt
gatcctacgtacacgtacaacaattttaccttggaggaacaatcgaagattcttgcagca
gcccggtcaaacaatgaacttgatacgactaaactgttacgtgacatgcccgatggaatt
gaaatcaatgaaattaagaaggcatatgaactttgcttcgaacgtatgaagattaatctt
gaaaaggaacacggtggaccggtcccagattgtttaccaaaagaattcagacgtatttaa
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