Fragilariopsis cylindrus: FRACYDRAFT_209625
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Entry
FRACYDRAFT_209625 CDS
T04784
Symbol
XDH
Name
(GenBank) xanthine dehydrogenase
KO
K00106
xanthine dehydrogenase/oxidase [EC:
1.17.1.4
1.17.3.2
]
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy00230
Purine metabolism
fcy00232
Caffeine metabolism
fcy01100
Metabolic pathways
fcy01110
Biosynthesis of secondary metabolites
fcy01232
Nucleotide metabolism
fcy04146
Peroxisome
Module
fcy_M00958
Adenine ribonucleotide degradation, AMP => Urate
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
FRACYDRAFT_209625 (XDH)
09110 Biosynthesis of other secondary metabolites
00232 Caffeine metabolism
FRACYDRAFT_209625 (XDH)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
FRACYDRAFT_209625 (XDH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fcy04147
]
FRACYDRAFT_209625 (XDH)
Enzymes [BR:
fcy01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
FRACYDRAFT_209625 (XDH)
1.17.3 With oxygen as acceptor
1.17.3.2 xanthine oxidase
FRACYDRAFT_209625 (XDH)
Exosome [BR:
fcy04147
]
Exosomal proteins
Exosomal proteins of breast milk
FRACYDRAFT_209625 (XDH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MoCoBD_2
MoCoBD_1
FAD_binding_5
Fer2_2
CO_deh_flav_C
Ald_Xan_dh_C
Fer2
Motif
Other DBs
NCBI-ProteinID:
OEU13284
JGI:
209625
UniProt:
A0A1E7F586
LinkDB
All DBs
Position
Unknown
AA seq
1429 aa
AA seq
DB search
MYVNGNRVPDDITEKARSNQTLLSFLRDGLNLKGSKLGCAEGGCGACTVMISKYDVESGE
LKHIAVNACLMPALAADGCHVTTIEGIGSVKDDNLHPIQKAMVEMHGSQCGFCTPGIVVA
IYSLYANNCNTKAIEEHMDGNLCRCTGYRPIWDAARSLCDDAEELVRGPCGTSCRECPER
DICEQDCNVEDKEKVTADEDEQKVIVTSSKDKMAMKKSLIASSPDWADHPKKLFPSDIID
ASSADSLALKKPLMVVDNAEFHGAGTWFKPTTLVGLLKLLKEFGNPVGGGYKIVVGNTEV
GIETRFKHSVYPRLIYPGDSVESIFQVSASTNKIVFGGCTPLSFIQHEAERLSKNDPIFT
RTLMPIHDMLRWFASTQIRNVACLGGNLVTASPISDMNPMLASMGANLVLSKLGEDDRTI
VSRTVLVSDFFLRYRTVDIQTSEFLERIEVPVLAKVFEYVKPFKQARRREDDISIVTSGM
RIKLVPKDGKFIIEHAALAFGGMAPKTVMAVKTAKVLIGSEFNRETFAKASECLMEEMKL
PEKVPGGQAAFRMTLTNSFLYKFFLSVVVELKDDVEGIEGNHSAFPDISLPLPSIPIVDE
AELSGAKTFITPDSVGKPFTHQSGPLHCTGEATYIDDINAPSGTLHASLILARECGVIFD
KFETERALKTPGVVGIYGSDTISLLKGENRQGDESVFLPIGETIGHIGQVLGIVVGESLE
SAEMGARAVAIKYGTSSNEKVPVSIEDAIASKSFYESTRYDLTRGDLSALQSLKELEDTT
SDTKVGDLVKISGTFRSGAQEHFYLETMSTLAVPTEGDTNLTIFASTQAASHTQEYIASA
TGTPMSKVVVRTKRMGGGFGGKETRNCFVSASAAVAAKAISRPVLLTLPRDVDMLTTGHR
HCFLSKYHASARMTEDGAKLESMQIDLYANGGWGVDLSGPIVSRACLHVDGVYNFPNIQV
EGVACKTAQAPHTAFRGFGGPQGIAACEHVMDHLAVACKIPKESFRRYNMYDESNTTHFG
MALSQSNRKWHVPSIWDRMTSELNLSQRRQDIDEFNAKNKWVKRGAALTPTKFGIAFGAH
FMNQGGALVHLYTDGTVLVTHGGTEMGQGLHTKVCQVAAQAFGISVEQVYINDTSTDKVA
NQIATAASMSTDLYGMCTLDACRQILARLKPYREKCGSEASLKDLAHAAFFDRVDLSAHG
FYAPDKSMCHFDVNKPKPDNYPDDKPENSWKGQPFNYFTQGVAYSEVEIDVLTGNHRTLR
ADVVVDVGSSINPAIDIGQIEGAFFQGMGWSTIEEIVYSDDDHTWCGKRSNLFTQGPGTY
KIPAFNDQPEIFNVSLLEDAENPIAVHSSKAVGEPPFFLGTTVFYAIKDAVSSFRKKASG
RESYFEFRMPGTSERIRMQCNDELGIKVKTAMLGGDEKAAGSYQPSGSY
NT seq
4290 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtgaatgggaatcgtgttcctgatgatatcacagaaaaagctagatccaatcag
acacttttatcgttccttcgtgatggattgaatctgaaagggtcgaagcttggatgcgct
gagggtggatgtggtgcttgtacagtaatgatttctaaatatgacgtagaatctggagag
cttaagcacattgccgtcaacgcgtgtctcatgccagctctagctgctgatggttgtcat
gtaactaccatagaaggaattggtagcgtcaaggatgataatcttcatccgattcagaag
gcaatggttgagatgcatggttctcagtgtggattctgtactccaggaatcgtcgtagcc
atttattcgttatatgcaaacaactgcaatactaaggccatcgaagaacatatggacggt
aatctctgtcgctgtacaggctatcgacctatttgggatgccgctcgctctctttgtgat
gacgcggaagaactcgtccgtggtccttgtggcacatcgtgccgtgaatgtccagaaaga
gatatatgtgaacaggactgcaatgtagaagataaggaaaaggtaacagcagacgaagat
gaacagaaagttatcgttacttcctccaaggataaaatggcaatgaaaaaatcgctcatt
gcttcatcaccagactgggccgaccacccaaaaaaactgttcccttcggatataattgac
gcttcttccgcggatagtctggctcttaagaaaccattgatggttgtagataacgctgaa
tttcatggtgccggaacttggttcaagcccacaactctggttggacttctgaaactttta
aaggaatttggaaaccccgttggtggaggttacaagattgtcgtgggcaacaccgaagtt
gggattgaaaccagattcaagcattccgtttacccccggttgatctatcccggggattct
gtggaatctatctttcaagtttctgctagtacaaataagattgtctttggtggctgcact
ccacttagttttattcaacacgaagcagaaagattgtcaaaaaatgatccaatttttacc
agaactctcatgcccatccatgatatgcttcgctggttcgcatccactcaaatccgcaat
gtagcatgcttgggaggcaacttggttactgctagtccaatatctgatatgaaccctatg
ttggcaagtatgggagccaatctggtgctatcaaagctcggtgaggacgatagaactatt
gttagtcgtactgttctcgtgtcggatttctttctaaggtataggaccgtggatattcag
acttctgagttcctagaaagaatcgaagttccagtcctggctaaggtgtttgaatacgtt
aaacctttcaagcaggcacgcagaagagaagatgatatcagtattgtaacttcgggaatg
cgcatcaagcttgttccgaaggatggtaaattcatcattgagcatgcagccttggcattt
ggagggatggctcctaagaccgtgatggccgtcaagactgcgaaggttctgattggttct
gaattcaatcgtgaaacgtttgcaaaagcatcagaatgtcttatggaagaaatgaagcta
ccagaaaaagtaccaggtggacaagctgctttccgcatgacacttactaattcttttctc
tataaattctttctttcggtagtggtagaactcaaggatgatgtggaaggtatcgaagga
aatcattctgccttccccgatatctctcttccacttcctagtatcccaattgtcgacgag
gctgaactctctggagcgaagacttttatcactcctgattctgttggaaaaccattcacc
catcagtctggtcctcttcattgtaccggtgaagctacgtatattgatgatataaatgcg
ccatctgggacattgcacgcttcacttatcttggctagagagtgtggagttatatttgat
aaatttgaaacggaacgggctctgaagacgcctggtgttgtaggtatctacggttcagat
actatatccttacttaaaggagaaaaccgccaaggtgatgagagtgtattccttcctatt
ggagaaacaattggacatataggacaagtgcttggaatcgttgtgggtgaatcattggaa
agcgcagaaatgggagcaagagctgttgccatcaaatatggcacttcaagtaatgaaaaa
gtccctgtgtctattgaagatgcaattgcctcgaaaagtttctacgaaagtacaaggtat
gatctcactcgtggagatctatctgcgttgcaaagtctgaaagagcttgaggatacgact
agcgatacaaaagttggcgatcttgtcaaaatttctggcacattccgctcaggtgctcag
gagcatttctatcttgaaactatgtctacacttgctgtacccaccgagggcgatacaaat
ctcactatatttgcttcgacgcaagcagcaagtcacacccaggaatatattgcctctgcc
acgggcacgcccatgtctaaggtagttgttcgtacgaaacgcatgggtggtggctttgga
ggcaaggagacacgtaactgtttcgtttcggcttcggcagccgttgcagctaaagctatc
agcaggcccgtgctcctcactcttccacgggacgttgatatgctcacaactgggcatcgc
cattgcttcttgtcgaaatatcacgctagtgctagaatgacggaagatggtgcgaagttg
gaatctatgcaaattgatctttatgctaatggaggatggggtgtagatttgtcggggcct
attgtaagcagggcatgtctccacgttgatggagtttacaactttccaaatatccaagtt
gagggtgtagcatgcaagactgctcaagcacctcacactgccttccgaggcttcggtggt
cctcaaggtatcgcagcctgtgaacacgttatggaccacctggctgttgcgtgtaagatt
cctaaggaatcttttcgtcgttacaacatgtacgatgaaagtaatacaacgcattttggt
atggcccttagtcaatccaaccgtaaatggcacgtcccatctatttgggatcgtatgacg
tctgaactaaatttgtcgcaacgcagacaggatattgacgagttcaatgccaaaaacaag
tgggtcaagcgtggagctgctcttacacccacaaaatttggtatcgctttcggcgcacac
ttcatgaatcaaggtggtgctctagtgcacttgtatactgatggtactgtactggtgacg
catggaggaacagaaatgggacaaggattgcacaccaaagtttgtcaggtagctgcgcaa
gcatttggtatttccgtggaacaagtgtacattaacgacaccagcactgacaaggttgct
aatcaaatcgcaacggcagcgagcatgtcaactgacctgtatggaatgtgtaccctcgat
gcatgtcgtcagattttggctagactcaaaccgtacagagaaaagtgtggttctgaggca
agtcttaaagatcttgcccatgcagctttttttgatagagttgacttgagtgcccatggc
ttttatgcacccgataagtccatgtgtcatttcgatgtaaataaaccaaaacctgataac
tatccagatgataagcctgagaattcttggaagggacagcctttcaattacttcacacaa
ggagttgcttattctgaagtggagattgatgtcttaactggaaatcatcgcacactacgt
gctgacgtggttgtcgacgttggatccagcatcaaccctgccattgatatcggtcagata
gagggagctttcttccagggaatgggatggagcacaattgaagaaatagtgtattcagat
gatgatcatacatggtgtggaaagcgtagtaacctttttactcagggcccaggtacatat
aagattcctgctttcaacgaccaaccggagatcttcaatgtatcattgttggaagatgct
gaaaacccaatcgctgttcatagcagtaaagccgttggagagccaccattctttttaggt
acaaccgtcttttatgctattaaagatgccgtaagcagctttagaaaaaaagcttctggt
agagaaagttactttgagttccgcatgcctggtacaagcgaacgtatacgaatgcaatgt
aatgatgaattgggtattaaagtaaaaacagctatgcttggaggagacgagaaagcagca
gggtcataccagccttcgggtagttactaa
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integrated database retrieval system