Fragilariopsis cylindrus: FRACYDRAFT_223273
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Entry
FRACYDRAFT_223273 CDS
T04784
Symbol
IPMI
Name
(GenBank) 3-isopropylmalate dehydratase
KO
K01702
3-isopropylmalate dehydratase [EC:
4.2.1.33
]
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy00290
Valine, leucine and isoleucine biosynthesis
fcy01100
Metabolic pathways
fcy01110
Biosynthesis of secondary metabolites
fcy01210
2-Oxocarboxylic acid metabolism
fcy01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09100 Metabolism
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
FRACYDRAFT_223273 (IPMI)
Enzymes [BR:
fcy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
FRACYDRAFT_223273 (IPMI)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aconitase
Aconitase_C
TIG
Motif
Other DBs
NCBI-ProteinID:
OEU22083
JGI:
223273
UniProt:
A0A1E7FWA0
LinkDB
All DBs
Position
Unknown
AA seq
783 aa
AA seq
DB search
MIFQSSALAAFGFTAPNWVVNQQSTKLDAGKTLYDKIFEDHTVTESDGSTLLYIDRHLVH
EVTSPQAFEGLRLANRGVRRPDCTLLTVDHNVPTEDRTQLVDVESFISEINSKTQVLQLE
KNVEDFGLKYFGMEDERQGIVHIIGPEQGFTLPGTTCVCGDSHTATHGAFGSLAFGIGTS
EVEHVLATSTLPQVKGKNFLIKIDGDLNEAVTSKDIILHICGIIGTAGGTGCVIEFAGSA
VRSLSMEARMSVSNMAIEAGARAGLIAPDEVTFEYLKGRPMSPSDEDWDNACAYWKSICS
DDDAVYDKVVEIDATDIAPTVTWGTSPQDVVPITGNVPDPNEAPDATRKAAMERSLNYIG
LEGNQPLEGVKIDKAFIGSCTNGRIEDLREVAAVAMGRKVADHVHAFVVPGSGLVKRQAE
DEGLDKILIEAGFDFREPGCSMCLAMNDDKLKPQERCASTSNRNFEGRQGGGGRTHLLSP
SMAAASAIAGSLADVRKFPYLGDKESDPRNIDKNNRGSRVFTTENYVSPGAVINPPAPYM
AQKTGDSEAAAGLPKFTVLKGKSAPLDIQNIDTDMIIPKEFLKTIKRAGLGFAAFAELRY
HNADEVATMGEDVAVMNDDFILNKPEYSGTSILIAGDNFGCGSSREHAPWSINDMGIKCL
ISTSFADIFYNNCFNNGMLPLILTREEIEVLLDDAADPNNELSVDLNNQKVTRSNGESFS
FDIDPFRKMCLLNGLDKIGLTLEKVDQITAFEKERSVAYPWLDGASLKVPDSIRMHQDAP
IWA
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgatattccaatcatctgcattagcagcattcggattcactgcaccaaattgggttgtc
aaccagcagtccacaaaattagatgccgggaaaaccttgtacgacaagatctttgaagat
cataccgtaaccgagtccgatggttctactctattgtacattgatcggcatttagttcac
gaagttacatcacctcaagcttttgagggtctacgattagcgaatcgaggagtacgtcgt
cctgattgtacactcctgacggtcgatcacaacgtccccacagaagatcgaacgcaactc
gtcgacgttgaaagtttcatcagcgaaattaattcaaaaacacaggtcttacaattagaa
aagaatgttgaagattttggtcttaagtactttggtatggaagatgagaggcagggaatt
gttcacatcatcggtccagaacagggatttactctaccgggaactacttgcgtttgtgga
gatagtcacaccgcaacacacggagcatttggttctctcgcatttggaatcggaactagt
gaagttgaacacgttcttgctacatctacactacctcaggtcaaaggtaaaaacttcctc
atcaagattgatggtgatctgaacgaggctgttacatccaaagatattatccttcatatt
tgtggtatcatcggtactgctggtggtactggttgtgtcattgaatttgctggaagtgcc
gtccgatctttgtccatggaggcacgaatgagtgtttcaaatatggctattgaggccggt
gcaagagctggtcttatcgcccctgatgaggtcacattcgaatatttgaagggacgtcca
atgtctccatctgacgaagattgggataatgcgtgtgcttactggaaaagtatttgctcg
gacgacgatgctgtgtatgacaaggtcgtagagatcgatgcgacagatattgctcctacc
gtaacttggggaacctcaccacaagatgttgtaccgattacaggtaacgttccggaccct
aacgaagcaccagatgctacccgtaaagctgcgatggagcgttccctaaattacatcggt
cttgagggcaaccaaccactcgaaggtgtaaagatcgacaaagcatttattgggtcatgt
actaatggtagaatcgaggatcttcgtgaagttgctgctgttgcgatgggtcgtaaagtt
gcggatcatgttcatgcttttgtagtacctggatcgggtctagtgaagagacaagccgaa
gatgaaggtctggataagatcttgatcgaagctggtttcgactttcgagagcccggatgt
tcgatgtgtctagcgatgaatgatgataagctcaaaccccaagaacggtgtgcctcgact
tccaatcgtaactttgagggtcgacaggggggtggtggccgtacgcatcttctttctccc
tcaatggcggcagcatctgctattgcgggttctcttgccgatgttcgtaagttcccttat
cttggagataaagaatctgaccctcgtaatatcgacaaaaataatcgtggatctcgtgtc
tttacaaccgaaaactatgtgtcccctggcgccgtgattaatcctccggccccttacatg
gcacagaagacgggcgatagcgaagctgctgctggattaccaaagttcactgtactaaag
ggcaagtctgctcctctagatatccaaaacattgacacggatatgattattccaaaagaa
ttcctgaagaccatcaagagagcgggacttggctttgctgcttttgccgaacttcgatac
cataatgctgacgaggttgctacgatgggtgaggatgttgctgtgatgaacgatgatttc
atcctcaataaaccagaatacagcggtacgtcaattttaattgcaggagataacttcgga
tgtgggtcgtcacgtgaacacgccccatggtcgatcaacgatatgggaattaaatgcttg
atttcaacgtcatttgcagacatcttctataataactgcttcaacaatggaatgcttcct
ttgattttgacacgtgaagagattgaagttcttcttgacgacgctgcggatccaaacaac
gaattaagcgtagatcttaacaatcaaaaagtaacacgttccaatggcgaatcatttagt
tttgacatcgacccattccgaaaaatgtgcctcctgaatggacttgacaaaattggctta
acgctagagaaggtagatcaaatcacagcatttgagaaagagaggagtgtagcttatcct
tggctggatggagcgagtttgaaggtgcccgattcgattagaatgcaccaagacgccccc
atctgggcctaa
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