Fragilariopsis cylindrus: FRACYDRAFT_225400
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Entry
FRACYDRAFT_225400 CDS
T04784
Name
(GenBank) insert subdomain of RNA polymerase alpha subunit
KO
K03027
DNA-directed RNA polymerases I and III subunit RPAC1
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FRACYDRAFT_225400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fcy03021
]
FRACYDRAFT_225400
Transcription machinery [BR:
fcy03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
FRACYDRAFT_225400
RNA polymerase I system
RNA polymerase I
FRACYDRAFT_225400
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-ProteinID:
OEU17737
JGI:
225400
UniProt:
A0A1E7FHW8
LinkDB
All DBs
Position
Unknown
AA seq
375 aa
AA seq
DB search
MPISKSTEKSTRTGIYVVKESGLDYEHIRDAVIPKDENEEENTLVFELIGCDPSFANALR
RILLSEVPTVAIENVYMWNNTSIIHDEVLAHRLGLIPIDVDARLFDPLEEGDDATDRNTL
VFQLQVKCPSRRQAANTAAKKKKSSDKDDEELNALTETEKSVVENTNLDRAAFVAAKKVA
IETPGRPYTLHLYSKDLIWMPQGDQESRFPNGIRPVHDDILIAKLRPGQEIELEAHARYG
IGQDHAKYSPVATASYRLYTNVEIVEPIYDEDAEELAHLYEPGVFELIPAPKKSGKKVTV
KVVNPYACTMSRNYMRNPTLNKSIRMTRVPNHFIFNVESVGMHKPAVLVAEAIKVLQQKC
TALMELTKLQEQAFS
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgccgattagcaagagtacagaaaaaagtacccgaacgggtatttatgttgtcaaagaa
agcggtcttgattacgaacatattagagacgcagttattccaaaggacgaaaacgaggaa
gagaataccttagtatttgaattgattggatgtgatccatcgtttgcaaatgcactgcgg
aggatattactatcggaagttccaacggtggctattgaaaatgtatatatgtggaacaac
accagtatcatccatgatgaagtattagcacatcgattgggattgatcccaatcgacgtc
gatgctcgattattcgatccattagaggaaggagatgacgcgaccgatcgtaacacatta
gtatttcaattacaggtcaaatgtccatctcgacgtcaggcggctaatacagccgcaaag
aaaaaaaaatctagtgataaggacgatgaggaattaaatgcattaacggaaacagaaaaa
agtgtagtagaaaatactaatttggatcgtgcagctttcgttgcagctaaaaaggttgca
attgaaacacctggacgaccatatacactacatttgtattcaaaagatttaatttggatg
ccacagggtgatcaagaaagtcgtttcccgaatggtattcgacctgttcatgatgatatt
ttaattgccaagctccgaccaggacaagaaattgaattagaagcacatgcacgatacgga
atcggacaagatcatgcaaagtattcacctgtcgcaacggcatcatatcgattatatacg
aatgttgaaattgtggaaccgatctacgatgaggatgctgaagaactagcacatttgtac
gaacccggtgtatttgaattaataccagcacctaaaaaatcagggaaaaaagttacagta
aaggttgttaatccatacgcatgtactatgtcacgaaattatatgcgaaatccaacatta
aacaagtctatcagaatgacaagagtaccaaatcattttatcttcaatgtcgaaagtgta
ggaatgcataaacctgccgttttggttgcagaagcaatcaaggtcttacagcaaaaatgt
acagcattgatggaattgacgaagttacaagaacaggccttctcatag
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