Candidatus Fermentithermobacillus carboniphilus: IMF26_00780
Help
Entry
IMF26_00780 CDS
T09838
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
fcz
Candidatus Fermentithermobacillus carboniphilus
Brite
KEGG Orthology (KO) [BR:
fcz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fcz03009
]
IMF26_00780 (rimO)
Enzymes [BR:
fcz01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
IMF26_00780 (rimO)
Ribosome biogenesis [BR:
fcz03009
]
Prokaryotic type
ribosomal protein modification factors
IMF26_00780 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
QUL98661
LinkDB
All DBs
Position
168417..169766
Genome browser
AA seq
449 aa
AA seq
DB search
MRAKSCCILVYGCAKNQVDAEEMASRLRAEGFAIIGDPRQADVIIVHTCGFIEPAKKESI
RGIFEACQAAKGQKEVSGKEPRVIVTGCLSQRYPDELLAEIPEIAGVAGTSSPRDIVEIV
GEVLSGEQKVKRVGPPGRGVPGDSRYRLKEISTPWAYLRVSEGCRHRCTYCAIPSIRGSL
VSRPEEDILEEARVLASRGAREINLIAQDLSDYGLDLYGERRLPQLIERLGEIPGVLWIR
LLYVRPDGVTGKLAQAMTGPKVVPYVDMPIEHGSAKILKMMGRPGPQTILEAVNTLRDKV
PGIAIRTTIIAGFPGETGEDVEKTREFLSAIRPHRVGVFPYSPEENTPASRFPGLLPERI
REERAEAIRRLGLELSRQHSESLIGKEIPVLLLRPSSRNGYWIGRGPHQAPEVDGKIYVR
AEGTAGDIVTAKVTRAGYLDLWARAITTP
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgagagccaagtcttgctgcatactggtatatggctgtgcgaagaatcaagtggacgcc
gaagagatggcaagccgccttcgggccgaaggatttgcaatcatcggcgatccgcgtcag
gctgatgtcataattgtccacacctgtggtttcattgagccggcgaagaaggaatctatt
cggggcatatttgaggcctgtcaagccgccaagggacagaaagaggtttcggggaaagaa
cctcgcgtcatagtcacgggttgcctttcccagcgatacccggacgaactcctggcagag
ataccggagattgcgggtgttgccggtacctcttctcccagagatatcgtggaaatcgtg
ggggaggttctttcgggagaacagaaggttaagagagtgggtcctcccgggcgcggggtg
ccaggcgatagtcgttacaggctgaaggaaatctctactccctgggcctacctgagggtg
agcgaaggttgtcgtcaccgctgtacttactgcgcgataccttccatcaggggctctctt
gtgtcgaggcctgaagaagatatcttggaagaagcgcgggtgctggcatcgaggggggcc
cgcgagatcaacctgatagcccaggatctctcagattacgggctggatctctacggtgaa
aggcgcctgccgcaactcatcgaaaggcttggagagattcccggcgttttgtggatccgg
ctcctttacgtgaggcctgatggggtgaccgggaaactggcacaagcgatgaccggtccc
aaagtagttccctacgtggacatgccgatcgaacacgggtctgcaaaaatcctgaaaatg
atgggaaggcctgggccccagactatcttggaggccgtgaacaccctccgagataaagtt
ccaggcatagctataaggactaccataattgcgggttttcccggagagacgggagaggac
gtggaaaagacacgggaatttttgtccgcaataaggcctcaccgcgtcggggttttcccg
tattctcccgaagaaaacaccccagccagccgctttccgggccttttaccggagaggata
agggaagagagggccgaggccataaggcgattggggctcgagctttccagacaacacagc
gaaagccttatcggaaaggaaatcccggtactgcttttaagaccttcctcgcgaaatggt
tactggatagggagaggtcctcaccaggctccggaggtagacgggaaaatatatgtgcga
gccgaaggcacagccggagacatcgtaactgcaaaagtgacccgggcgggatatcttgac
ctgtgggcgagggcgatcacaaccccataa
DBGET
integrated database retrieval system
