Flavobacterium endoglycinae: J0383_16535
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Entry
J0383_16535 CDS
T08015
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
fen
Flavobacterium endoglycinae
Brite
KEGG Orthology (KO) [BR:
fen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fen03009
]
J0383_16535 (rimO)
Enzymes [BR:
fen01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
J0383_16535 (rimO)
Ribosome biogenesis [BR:
fen03009
]
Prokaryotic type
ribosomal protein modification factors
J0383_16535 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
DUF5005
Motif
Other DBs
NCBI-ProteinID:
QSW87874
LinkDB
All DBs
Position
complement(3717700..3719013)
Genome browser
AA seq
437 aa
AA seq
DB search
MRTKSLKKNKINVITLGCSKNVYDSEVLMGQLRANGKEVTHEAKAKDEGNIIVINTCGFI
DNAKAESVNMILEYADKKDKGLVDKVFVTGCLSERYRPDLEKEIPNVDQYFGTTELPQLL
KALGADYKHELLGERLTTTPKNYAYLKIAEGCDRPCSFCAIPLMRGSHVSQPIEKLVKEA
EGLAKNGVKELILIAQDLTYYGLDLYKKRNLGELLEALVKVEGIEWIRLHYAFPTGFPMD
VLEIMKREPKICNYIDIPLQHISDSILKSMRRGTTQAKTTQLLKDFRAAVPGMAIRTTLI
VGYPGETQEDFEILKDFVQEMKFDRMGCFAYSHEENTHAYLLEDDVPDDVKQARANEIME
LQSQISWDLNQEKVGQVYKCIIDRKEGAHFVGRTEFDSPDVDNEVLIDASKHYVKTGEFV
NIKIIEATEFDLYGEPA
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccaagtctttaaaaaagaacaaaattaacgtaatcactcttgggtgttcaaaa
aatgtatatgatagtgaagtgcttatgggtcagcttcgtgcaaacggaaaagaagtaact
cacgaagcaaaagctaaggatgaaggaaacattattgtaatcaacacttgtggttttatt
gataatgcaaaagcagagtcagtaaatatgattttggaatatgctgataaaaaggacaaa
ggattagttgataaagttttcgttacaggatgcttgtctgaacgttacagacctgattta
gaaaaagaaattccaaatgtggatcaatattttggaacaactgaattacctcaattatta
aaagctttaggagcagactataaacatgaattactaggagagagattaacaacaactcct
aaaaattatgcttatttaaaaattgccgaaggatgcgacagaccatgcagtttttgtgct
atcccgttaatgcgcggttctcacgtttcgcagcccattgaaaaattggttaaagaagct
gaaggtttagctaaaaatggtgttaaggaattaatcttaattgctcaagacctaacttat
tatggtcttgatttatataaaaagagaaatcttggagaacttttagaagctttggttaaa
gtagaaggaatcgagtggattcgtcttcactatgcttttccaactggtttcccaatggat
gttttggaaatcatgaaacgcgaaccaaaaatttgtaattacattgatattccgctacag
catatttctgattctattttaaaatcgatgcgtcgcggtactacacaagccaaaactaca
caacttttaaaagatttccgtgcagccgttccaggaatggcgattagaactactttaatt
gttggatatcctggagaaactcaggaagattttgagattttgaaagatttcgttcaggaa
atgaaatttgacagaatgggttgttttgcatattctcacgaagaaaacactcatgcttac
ttgttagaggacgatgttccagatgacgtaaagcaagcaagagccaatgaaattatggaa
ttacaatctcaaatttcatgggatttaaaccaagaaaaagtaggtcaggtttataaatgt
atcattgaccgaaaagaaggcgcgcattttgtgggtagaactgagtttgatagtccggat
gttgacaatgaagttttaattgatgcatctaagcattatgtaaaaacaggcgaatttgtt
aatatcaagataattgaagcaacagaatttgatttatacggagaacctgcttaa
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