Formica exsecta (narrow-headed ant): 115246136
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Entry
115246136 CDS
T07422
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
fex
Formica exsecta (narrow-headed ant)
Pathway
fex03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
115246136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fex03021
]
115246136
Enzymes [BR:
fex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
115246136
Transcription machinery [BR:
fex03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
115246136
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
115246136
NCBI-ProteinID:
XP_029680632
LinkDB
All DBs
Position
Unknown
AA seq
1676 aa
AA seq
DB search
MRKYYKQRLTPKHQDSQHLLFSVFTANDIRNLSVTKIRTPLSFNILGHPLKGGLYDPSLG
TTKNNFELCSTCGYNSSKCPGHFGHIELPVSVVNPLFHKGLSTLFKLSCFSCFTFQLPSY
MKTLLSARLKLLYQGQLADLETLDQEINYVKSNVQKIEEQTEYICDVIDIYMQNFSNRTR
FGQPVTENHEYKSNIKNVNTQWHTYVEYILKQYVRNKAGICINCNNVLPKITTLQNKIMI
SNKGAPKEILSHEVIHKLDTVMIMPDQSKEYMRRLWNNERNFLQIIIPCLELVDIEYPTD
IFFFEVVPVLPPIVRPVNFINGQMIEHPQTHIYKSIIQDCLVLRNIIQTIQDGGTDHLPQ
EGRLVFEQIKGHTAVEKLHNAWQTLQSNVDHLMDRDINRTPESINGLGLKQILEKKEGII
RMHMMGKRVNFAARSVITPGPDLNIXVTPWNVVELRRLVLNGPDVHPGAVIIENEDGSIQ
AISSNDSMQREAIAKRLLTTSDRTNESFSGIKIVHRHLQNGDVLLLNRQPTLHKPSIMAH
KARVLKGEKTLHLHYANCKAYNADYDGDELNAHFPQNELARSESYNIANVSNQYLVPKDG
TPLSGLIQDYMISGVQLTTRGRFFSRTHYTQLIYAALSMIQGDIILSPPTIIKPKPLWSG
KQIISTIIINIIPSHKARINLISNTKINVKEWQVESPRHWKYGTEFKNPMTMSEAEVVIR
HGELLCGVLDKTHCGATSYGLIHCIYELYGETYASKMLSAFAKLFQTFLQYNGFTLGVED
ILINRRIDKKRKEIISNCRKVGEDIQKSVVKIPDNIFMDELKNKIEESYWDNPKFRAQVD
HKYKSVLDVYTNDINKTCLQIGLFKKFPNNNLQLMVQSGAKGSMVNTMQISCLLGQSELE
GKRPPLMISGKSLLSFPAYDPTPRAGGFIDSRFMTGIKSQECFFHCMAGREGLVDTAVKT
SRSGYLQRCLVKHLEGLVVGYDATVRDYDGSLIQFYYGEDGLDIPGSRFLRKEQIAFLVD
NKDAIIDAKLLEYLKTDNKEIVKMMKKIKKWENKNGSSLQKKRISEFTKFSIENQNNSLK
RRSIDSHSGRSKATLSLIRKWIRATEEVKETFRAQYAKCPDPVTSKYRQDVEFGVLPERI
EGLIDEYLSRSSKIKKSNLRDLLSIKVIKTICPPGEPVGLLAAQSIGEPSTQMTLNTFHF
AGRGDMNVTLGIPRLREILMLATKNIKTPSMEIPFQNNLQNLEKQAKKLRLKLTKCVLRD
VLKDITISRRMEEDSHRKLVHTITIEYLPYKSYKGEFSIRPQDVIKRTEKIFFMNIFKEI
QKLTKASKVLLHFEGEKRRASDEDEIIDQLDPDGTMPENTERRIKMDLGEMHESSDEEEV
AEDADATMSRSLSRHQENQEYEDSEEEEEEVEDVINDKEEEANNNNNANKNSENKEDNEE
NDDYTRERLNNKKNDTYSYRKKCIIDMYKHVTDYDYDESKLSWCKFTFWLPLEMIKLDLP
TIIRNAAEKTVLWETPYIKKAFTFQNSENETILKTDGLNIVEMFKYDNILNLNRLYSNDI
HNISQTYGIEAANKVIVREVRDVFKMYGITVDFRHLALIADYMTFDGTFQPLSRKGMENS
ASPLQQISFESSLAFLKSATLQGKKDDISSPSSRLMLGQPCKSGTGAFSVLPSLYM
NT seq
5031 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaatattataagcaacgtctaacaccaaaacatcaagactcccagcatttatta
ttctcagtgttcacagcaaacgatataaggaatttaagtgtaacgaaaatcaggacacct
ctatcttttaacattcttggacatccactaaagggtggattatatgatccatccttaggc
acaacaaagaataatttcgaactatgtagcacgtgtggatataatagctccaagtgtcca
ggtcactttggacacatagaattgccagtatctgttgtcaatccattatttcacaaagga
ttatccacattgttcaaattgtcgtgcttcagttgttttacttttcaattaccatcatat
atgaagacgttattgtctgcaagattaaagttgctttatcaaggacaacttgctgatctt
gaaactttagatcaagaaataaattatgtaaaatcgaatgttcaaaaaatagaagaacaa
acggagtatatttgtgatgtaatcgatatttacatgcaaaacttttccaatagaaccaga
tttggtcagcctgtgactgagaatcatgagtataaaagcaacataaagaatgttaataca
cagtggcatacctatgttgaatatatacttaaacaatatgtcaggaacaaagctggaata
tgcattaattgtaacaatgttctaccgaaaattacaacattgcaaaataaaataatgata
agcaataaaggagcccctaaggaaatattgtcgcatgaagtgattcataaactggataca
gtgatgattatgccagatcagtctaaggaatacatgcgacgattatggaataatgaaagg
aattttcttcagataattataccctgcttagaattagttgatattgaatatccaactgat
atattctttttcgaagtagtacctgtgctaccacccattgtgcgaccagtaaattttatt
aatggccaaatgatcgaacatcctcaaactcatatctataaaagtattatacaggattgt
ttggtcttaagaaatattatacaaacgattcaagatggaggtaccgatcacttacctcag
gagggtcgacttgtctttgaacaaataaaaggacatacagcggtcgaaaaattacacaat
gcctggcaaacattgcaaagcaatgttgatcatctgatggatcgtgacataaataggact
ccggaatctatcaatggtctaggcttgaaacaaattctcgagaaaaaagaaggtattatt
agaatgcacatgatgggtaaaagagtgaattttgccgcgcgttcggtcatcactccaggt
cctgacttgaatatcngagtgacaccatggaacgtcgttgaattgcgacgattagtttta
aacggacccgatgttcatcctggggcggttataatagaaaatgaagatggatcaatacaa
gccattagtagtaacgattctatgcaaagagaagctattgcaaaacgtcttttaaccaca
agcgacagaactaacgaatccttcagtggcattaaaatagtacatcgacatcttcaaaac
ggcgatgtattgttattaaataggcaaccgacgttacataaaccgagtataatggctcat
aaggcacgtgttctcaaaggagaaaaaacattgcatcttcattatgcaaactgtaaggca
tataatgcagattacgatggagatgaactcaacgctcattttccacaaaacgaactagct
agaagtgaaagttataatatagctaatgtaagtaatcaatatctcgtaccaaaagacgga
actccgttaagtggtcttatacaagattacatgatatccggggtacaattaacgaccagg
ggtcgatttttctcgcgaactcattatacgcaattaatttatgccgcactctcgatgata
caaggagatataatcctctcaccaccaactattatcaaaccaaaacctctatggtcgggt
aaacaaattatttcaaccattataattaatattattccttcgcacaaggcacgaattaat
ctaatctctaatacaaaaattaatgtaaaagaatggcaagtagaatcaccacgacattgg
aaatatggaacagaatttaaaaatccaatgactatgtcggaagctgaagttgtaattcgg
cacggagaactactatgtggggtacttgataaaacgcactgtggtgcgacttcttacggt
cttattcattgtatttatgagttatatggggaaacgtacgcgagtaaaatgttaagcgca
tttgccaaattgttccaaacgtttctgcagtacaatggatttactctgggcgttgaagac
attctgataaatcgtagaatcgacaaaaaacgtaaagaaataatttctaattgtcggaaa
gttggagaagatatacaaaaatctgtcgtaaaaatacctgataatatatttatggatgaa
cttaaaaacaagatagaagaatcttattgggataatccgaaatttcgcgcacaagtcgat
cataagtacaagagcgtgttagatgtttacactaacgatattaacaaaacgtgtctgcag
ataggactcttcaaaaaatttccaaataataacttacagcttatggtgcaatctggtgca
aaaggatccatggttaatactatgcaaatatcgtgtttgcttggccaaagcgaattggaa
ggtaaaaggccgccattaatgatcagtgggaaaagtttattaagtttcccagcgtatgat
ccgacacctagagccggtggtttcatcgatagtagatttatgactggtattaaatctcag
gaatgttttttccattgcatggcaggacgcgaaggtcttgttgatactgcggtaaaaact
agtagatctggttacttacagagatgtcttgtgaaacatctagaaggattggttgtcggt
tacgatgcgacagtcagagactatgatggtagtttaattcaattttattatggagaggat
ggccttgatataccaggttcgcgattcttaagaaaagaacaaatcgcatttctggtcgac
aataaagacgctattatagacgcaaaattattggaatatctaaaaacagataataaagag
attgtaaaaatgatgaaaaagatcaaaaaatgggaaaataaaaatggctcttctttacaa
aagaaaagaattagcgaatttactaaattctctattgagaatcaaaataatagtttgaaa
agaagaagcatcgatagccatagtggaaggagtaaggccacattatcacttatacgaaag
tggataagagcgacggaagaagtgaaagagacatttcgtgcacaatatgctaaatgtcct
gatccagtaacatcaaaatacaggcaagatgttgaattcggtgtattaccagaacgaata
gaaggcttaatagacgaatatctttctcgttcttcgaagattaaaaaatctaatttaaga
gatttgttatccatcaaagttataaaaaccatttgtccacctggtgaaccggttggtttg
ttagcggcgcaatctataggcgaaccatccactcaaatgaccttgaatacatttcatttt
gctggacgtggtgacatgaatgtgactctaggtattcctagattacgtgagatcttaatg
ttggcgacgaaaaatataaaaactccaagtatggaaataccctttcaaaacaatctgcaa
aatcttgaaaagcaagcaaagaagctgagattaaaattaacaaaatgtgtcctgcgtgat
gtattgaaggatatcacgataagtaggagaatggaagaggattcgcatagaaaattagtg
cacactataacgatcgaatatcttccctacaaatcttataaaggggagttttccattcgc
ccacaggatgtgattaagcgcactgaaaaaatcttttttatgaatatatttaaagaaatc
caaaaactcaccaaagcaagcaaagttttattacatttcgaaggagaaaaaagacgggca
agcgacgaggatgaaataatagatcaacttgatcctgacggcacaatgccggaaaatact
gaaagaagaataaagatggatttaggagagatgcatgaatcatctgatgaggaagaagtt
gcagaggatgctgatgcgacaatgagtagatcattatcgcgtcatcaagaaaatcaagaa
tatgaagattcagaagaagaagaagaagaagtggaagatgttataaatgataaggaggaa
gaagcaaataataataataatgcaaataaaaactcagaaaacaaggaagataatgaagag
aatgatgactatactagagagagattaaataacaagaaaaatgacacatattcttacaga
aaaaaatgcatcatagatatgtataagcatgttaccgattatgattatgacgaaagtaaa
ttatcatggtgcaaattcacattttggttaccgcttgaaatgatcaaattagatttgccg
acaataattagaaatgctgcagaaaaaactgttttatgggaaacaccgtatattaagaaa
gcttttactttccaaaatagtgaaaatgaaacaattctcaaaacagatggtttaaatata
gtagaaatgttcaagtatgataatatacttaatttaaataggttatactccaatgatatt
cacaatatttctcaaacatatggaattgaagctgcgaataaagttattgtgagagaagtt
agagacgtcttcaagatgtatggtattactgtagattttaggcatctagccttaattgcc
gattatatgacgtttgatgggacatttcaaccacttagtcggaaaggaatggaaaattcc
gcttcaccattacagcaaataagttttgaaagctcgctagcttttttgaaaagtgcgaca
ttgcaaggaaaaaaggatgatatatcatcaccgtcaagtagactgatgttaggacaacca
tgcaaatctggtactggagcattctctgtattaccatcgttatatatgtaa
DBGET
integrated database retrieval system
