Fusarium falciforme: NCS54_00673600
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Entry
NCS54_00673600 CDS
T09198
Name
(RefSeq) DNA-directed RNA polymerase subunit
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
ffc
Fusarium falciforme
Pathway
ffc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ffc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCS54_00673600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ffc03021
]
NCS54_00673600
Enzymes [BR:
ffc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCS54_00673600
Transcription machinery [BR:
ffc03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
NCS54_00673600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
zf-tcix
Motif
Other DBs
NCBI-GeneID:
77792685
NCBI-ProteinID:
XP_053008158
LinkDB
All DBs
Position
5:complement(join(1633848..1637843,1637895..1638044,1638100..1638211,1638280..1638371))
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AA seq
1449 aa
AA seq
DB search
MATDASTKRAVKEQLVDKLPKRFKGIKFGIQSNQDIANQAVLEVSDRLLYDIENNRAPYR
HGPLDSRLGTSSKAGKCATCELSLSECNGHFGHVRLPLPAFHVGYLRFIMSILQEICKDC
GRVLLEEPERRQFLKELRRPFLDNLRRTQICKKINAECRKIKTCPYCGSINGQIRKIGVL
KLAHDKFSFYNKSTSVKKVPPESKIKFDNSFTEAKRENPELDKHLRKAMEDLNPLRVLNL
FKMISPTDCELLGLDPAEGRPEMFIWQFLPAPPVCIRPSVAQDNASNEDDITTKLADIVW
VSGMIRSALQKGSPVQTIMEQWEYLQTQIAMYVNSDVPGLQQPGFGKATRGFCQRLKGKQ
GRFRGNLSGKRVDFSGRTVISPDPNLGIDQVAVPQLVAKNLTYPERVQRHNIEKLRQCIK
NGVDVWPGAQRVVKQDDGGYSINLKFANRDNTARDLKYGDVVERHLEDNDIVLFNRQPSL
HKLSIMSHLAKVRPWRTFRLNECVCGPYNADFDGDEMNLHVPQTEEARAEAINLMGIKHN
LATPKNGEPVIAATQDFITAAFLLSSKDRFFDRKTFTYLCMHMMDGKTHLDMPPPAIIAP
QALWTGKQLFSMLMRPNKDSRVKVNLDAKCRAYKARPGQCPDMDPNDGWLVVRNSEVMCG
RMDKSTVGSGKKDSIFYVILRDFGPDEAVVAMNRLAKLCARQLTNRGFSIGVGDVFPTQS
LNEEKEKLVAVAYKQCDDLIETFKAGKLEKAAGCNQEQTLENSMSGILSKVRQQAGSYCV
DTLSRNNAPLIMAKSGSKGSDINVAQMVALVGQQIIGGSRVADGFQDRTLPHFHKNARQP
PSKGFVKNSFYTGLFPTEFIFHAMSGREGLVDTAVKTAETGYMSRRLMKSLEDLSTQYDD
TVRTSGGGIVQFQFGADKLDPVDMEGSAEPVHFLRTWTHAESLTRDNSEASMTPEEIRSF
CDSVLETERRRYVRRGLLHNEVLDYGDTSDYGIDEHEGARGFLKAIETHVEGLASKLERV
RKLAGFEGDVMVRATAQDHADRTAKVTLSTLRLFIKMCLDKYKKAHVEPGHAVGAVGAHS
IGEPGTQMTLKTFHFAGVAGMSITQGVPRIKEIINASKTISTPVITCPLENNEQIEAARV
VKGRIEKTYISDVLRFVEDEWRTNEGNVVLQIDSTALSDMHLGIGPYDIAEAICKQRKLK
VQRDDLSIDGERIIVRVRDVSDSTKRTTARSKAAADDTGDMLLRANFLRRVLPTVPISGY
PEATRAIIQTSEQNTHTVLVEGYGLRECMTTEGVIGIKARSNNVMECRDVLGIEAARTTI
ADEIGEVMGDMGIDPRHMQLLADVMTYKGEVLGITRFGLSKMRDSVLQLASFEKTPDHLF
EAAAGMKTDQIEGVSECIIMGQTMRVGTGAFQVVRRLGIQGGDLKQKPTTFEDAWAAETA
LKRKARRKV
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atggctaccgacgcgtccacaaagcgtgccgtaaaggagcagcttgtggataagctgcct
aagcgattcaagggcatcaaatttggcattcaatccaaccaagacattgccaatcaggct
gtcctcgaggtctctgaccgcttgctttatgacatcgagaataatcgcgccccatatcgc
catggtcctctcgactcccgactgggaacctcgagcaaggcaggaaaatgcgcaacctgc
gagctatcgctgtcggagtgtaatggacactttggtcatgtccgccttccgttgccggcc
ttccacgtcggctacctgcgcttcatcatgtctatcctgcaagaaatttgcaaggattgt
ggccgagtgttactggaagaacctgaacgacggcagtttctgaaggagttgcggcgaccg
ttcctcgataacctacgccgaactcaaatatgcaaaaagatcaatgcagaatgccgaaag
atcaagacttgcccatactgtggctccatcaacggccagattcgaaagattggtgtcctc
aaacttgcccacgacaagttctccttttacaacaagtccacctcggtgaagaaggtcccc
cccgagagcaagatcaagttcgacaactccttcaccgaggcgaagcgcgagaaccctgag
ctcgataagcatcttcgcaaggccatggaggatctgaatccgctgagggttctcaacctc
ttcaagatgataagccctaccgactgcgagctccttggcctcgaccctgccgaaggtcgc
ccggaaatgtttatctggcaattcctgcctgcccctccagtttgcatcagaccctctgtt
gcccaagacaatgcaagcaatgaagacgacatcacaaccaagctcgccgatatcgtctgg
gtcagcggcatgatccgatctgccctgcaaaaaggctctccggttcagacgatcatggaa
cagtgggaatacttgcagacccagatcgccatgtacgtcaatagtgatgttcccggcctc
cagcagcctggattcggtaaagccacgaggggcttctgccaacgcctgaagggcaagcaa
ggccgcttccgaggaaacctctctggaaagcgtgtcgacttctctggaagaaccgtcatc
tcccctgaccctaacctcggtatcgatcaagtggctgtccctcaacttgttgccaagaac
cttacctaccccgaaagggtacagcgacacaatatcgagaagctccgccagtgtatcaag
aatggagtcgatgtctggccaggggcgcagcgagtcgtcaagcaggatgacggtggctac
tcgatcaacttgaaatttgccaacagggataatacagcccgagatctcaaatatggagat
gtcgttgagcgccatcttgaggacaacgatattgtgctcttcaaccgtcagccgtctctg
cataaactgagtatcatgagccatcttgcaaaagttcgtccttggaggacattcaggctc
aacgagtgtgtttgtgggccgtacaacgccgattttgatggtgatgagatgaacctccat
gttccgcagacagaggaagctcgtgctgaagccatcaatctgatgggaatcaagcacaac
ttggcgacacccaagaacggcgaacctgtcattgctgcgacccaggatttcatcacggcg
gctttcttgctcagcagtaaggatcgattctttgaccgcaagaccttcacctatctgtgc
atgcacatgatggatggtaaaacccaccttgatatgcctccgccagccattattgcacca
caggctctttggaccggaaagcagctcttcagtatgctcatgcgacccaacaaggattca
cgggtcaaggtcaaccttgatgccaagtgccgagcgtacaaggcccgacccggccaatgc
cccgacatggaccccaacgacggctggcttgttgtacgcaactccgaggtcatgtgtggt
cgcatggacaagtctacagtgggatcaggcaagaaggattcaattttctatgtcattctt
cgtgattttggcccagacgaagctgtcgtcgccatgaacagacttgccaagctgtgtgcg
cgtcaattgacaaaccgaggcttctccattggcgtgggagatgtcttcccaacccagtcg
ctcaacgaagagaaagaaaagctggtagccgtcgcctacaaacagtgcgatgacctcatc
gagaccttcaaagccggcaaacttgagaaggcagctggctgcaaccaggagcaaaccctg
gaaaactccatgtctggtattctgagcaaagtccgacagcaggcgggttcatactgcgtt
gacaccctgagccgcaacaacgcccctcttattatggccaagtctggctccaaaggttcg
gacatcaacgtggcgcagatggttgcactcgtcggacagcagattatcggcggttcacgt
gtggcggacgggtttcaggatcgaactcttccgcactttcacaaaaatgctcggcagcct
ccatcaaagggtttcgtcaagaacagcttttacaccggccttttccccaccgagttcatc
tttcacgccatgtcgggccgtgaaggtctggtcgatacagctgtcaagactgctgaaact
ggctacatgtctcgacgactcatgaagtcacttgaagatttgtccacgcagtacgatgat
acagtgcgaacctcgggtggtggcattgtgcagttccagtttggcgcggacaaactcgac
cccgtcgatatggaaggttctgcagagccggtgcatttcctgcgaacctggactcacgca
gagagcttgaccagggacaatagcgaggcatccatgaccccagaagagatcaggtcgttc
tgcgactccgtattggagaccgaacgaagacgttatgtccgacgtggcctcctgcataat
gaagtcctggattatggggacacgagcgactatggtatcgacgaacacgaaggtgccaga
ggatttcttaaagcgattgagacccacgtcgaaggtctggcatcgaagctggagcgggtc
aggaagcttgctggatttgagggcgatgtgatggtgagggcaacagctcaggaccacgcc
gaccggacggccaaggttaccttgtccacactccgcctcttcatcaagatgtgtcttgac
aagtacaagaaggcgcacgtcgaacctgggcatgctgtcggtgctgtcggcgcccattct
atcggtgaacctggtactcagatgacactgaagacgttccatttcgccggtgttgctggt
atgagtatcactcagggtgttcctcgaatcaaggaaatcatcaatgcttcgaagaccatc
agtactccagttatcacttgcccgctggaaaacaatgaacagatcgaggcggcgcgagtg
gtcaagggacgcatcgaaaagacgtacatttctgatgtcttgcgtttcgtcgaggatgag
tggcgtaccaacgagggcaatgtcgttctccaaatcgattcaaccgctctctcagacatg
cacctgggtattgggccttacgacatcgctgaggcaatctgcaagcagcgcaagttgaag
gtgcaacgcgatgatctgtcaattgacggcgagagaattattgttcgtgtgcgcgatgtc
agcgactctacaaagaggacgactgcccgaagcaaagccgctgctgatgacaccggggac
atgctgctacgggccaatttcctgcgtcgtgtgcttcccacagtaccgatttctggttat
cccgaagcaactcgtgccatcatccagacctcggaacaaaacactcacaccgtcttggtt
gagggttatgggcttcgagaatgtatgacgacggaaggtgtcatcggtatcaaggcgcgc
tcaaacaatgtaatggaatgccgagatgttttgggtattgaggctgcaagaaccactatc
gcagacgaaatcggcgaggtcatgggtgacatgggtattgatccgcgacacatgcagctc
ctggctgatgtgatgacctacaagggcgaggtactgggtattacgcgttttggtttgtcc
aagatgagagacagcgtgctgcaactggcctcgttcgagaaaactccggatcatctcttc
gaggctgcggccggcatgaagacggaccagatcgaaggtgtcagtgaatgcatcatcatg
ggtcaaacgatgagagttggaaccggtgccttccaggtggttcgtcgtctgggtattcag
ggaggagatctcaaacagaagccaacaacgtttgaagatgcttgggctgccgagacggcg
ctgaagcgaaaggcacgccgcaaggtttag
DBGET
integrated database retrieval system